RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 CNGA3Q16281 694 aa22.56■■□□□ 1.2
KDELR3-202ENST00000409006 ZNF564Q8TBZ8 553 aaPredicted RBP22.56■■□□□ 1.2
KDELR3-202ENST00000409006 GLMNQ92990 594 aa22.56■■□□□ 1.2
KDELR3-202ENST00000409006 IQCDQ96DY2 449 aa22.56■■□□□ 1.2
KDELR3-202ENST00000409006 ATXN7L3BQ96GX2 97 aa22.56■■□□□ 1.2
KDELR3-202ENST00000409006 COQ10AQ96MF6 247 aa22.56■■□□□ 1.2
KDELR3-202ENST00000409006 CCDC3Q9BQI4 270 aa22.56■■□□□ 1.2
KDELR3-202ENST00000409006 PACSIN1Q9BY11 444 aa22.56■■□□□ 1.2
KDELR3-202ENST00000409006 DOLKQ9UPQ8 538 aa22.56■■□□□ 1.2
KDELR3-202ENST00000409006 PMS2P1A4D2B8 440 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 MFSD11O43934 449 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 SOCS5O75159 536 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 MAP3K6O95382 1288 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 TNFP01375 233 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 ALPIP09923 528 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 LHCGRP22888 699 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 GJC1P36383 396 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 TRIM23P36406 574 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 HSPA9P38646 679 aaKnown RBP22.55■■□□□ 1.2
KDELR3-202ENST00000409006 MMP13P45452 471 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 LSSP48449 732 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 RPIAP49247 311 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 TAS2R40P59535 323 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 KIAA1024LP59773 190 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 CCDC173Q0VFZ6 552 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 DPYSL3Q14195 570 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 MARC1Q5VT66 337 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 ESRP1Q6NXG1 681 aaKnown RBP22.55■■□□□ 1.2
KDELR3-202ENST00000409006 LVRNQ6Q4G3 990 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 LRRC69Q6ZNQ3 347 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 SFTPA2Q8IWL1 248 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 ARL10Q8N8L6 244 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 RBM15Q96T37 977 aaKnown RBP eCLIP22.55■■□□□ 1.2
KDELR3-202ENST00000409006 POLR1BQ9H9Y6 1135 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 SATB2Q9UPW6 733 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 DGKBQ9Y6T7 804 aa22.55■■□□□ 1.2
KDELR3-202ENST00000409006 A0A0U1RQS6 177 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 CACNB4O00305 520 aaPredicted RBP22.54■■□□□ 1.2
KDELR3-202ENST00000409006 CPP00450 1065 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 HNRNPH3P31942 346 aaKnown RBP22.54■■□□□ 1.2
KDELR3-202ENST00000409006 SERPINB6P35237 376 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 PDX1P52945 283 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 IHHQ14623 411 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 DENND2CQ68D51 928 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 NCBP2-AS2Q69YL0 99 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 PNCKQ6P2M8 343 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 RBM44Q6ZP01 1051 aaKnown RBP22.54■■□□□ 1.2
KDELR3-202ENST00000409006 HSD11B1LQ7Z5J1 315 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 GKN2Q86XP6 184 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 CBARPQ8N350 705 aaPredicted RBP22.54■■□□□ 1.2
KDELR3-202ENST00000409006 OR56A4Q8NGH8 313 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 TPCN2Q8NHX9 752 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 LRRN4Q8WUT4 740 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 NAT6Q93015 286 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 SMIM14Q96QK8 99 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 NT5MQ9NPB1 228 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 RCOR3Q9P2K3 495 aaPredicted RBP22.54■■□□□ 1.2
KDELR3-202ENST00000409006 GPR34Q9UPC5 381 aa22.54■■□□□ 1.2
KDELR3-202ENST00000409006 NPIPB15A6NHN6 443 aaPredicted RBP22.53■■□□□ 1.2
KDELR3-202ENST00000409006 RRP8O43159 456 aaKnown RBP22.53■■□□□ 1.2
KDELR3-202ENST00000409006 HEXIM1O94992 359 aaKnown RBP22.53■■□□□ 1.2
KDELR3-202ENST00000409006 VIPR1P32241 457 aa22.53■■□□□ 1.2
KDELR3-202ENST00000409006 C3orf38Q5JPI3 329 aa22.53■■□□□ 1.2
KDELR3-202ENST00000409006 TSPAN33Q86UF1 283 aa22.53■■□□□ 1.2
KDELR3-202ENST00000409006 TEX26Q8N6G2 289 aa22.53■■□□□ 1.2
KDELR3-202ENST00000409006 ATL2Q8NHH9 583 aa22.53■■□□□ 1.2
KDELR3-202ENST00000409006 CCL4L1Q8NHW4 92 aa22.53■■□□□ 1.2
KDELR3-202ENST00000409006 SCG3Q8WXD2 468 aaKnown RBP22.53■■□□□ 1.2
KDELR3-202ENST00000409006 CCDC74AQ96AQ1 378 aa22.53■■□□□ 1.2
KDELR3-202ENST00000409006 NAF1Q96HR8 494 aaKnown RBP22.53■■□□□ 1.2
KDELR3-202ENST00000409006 TMEM168Q9H0V1 697 aa22.53■■□□□ 1.2
KDELR3-202ENST00000409006 PRORYQ9H606 182 aa22.53■■□□□ 1.2
KDELR3-202ENST00000409006 ASCL3Q9NQ33 180 aa22.53■■□□□ 1.2
KDELR3-202ENST00000409006 CTTNBP2NLQ9P2B4 639 aa22.53■■□□□ 1.2
KDELR3-202ENST00000409006 PHTF1Q9UMS5 762 aa22.53■■□□□ 1.2
KDELR3-202ENST00000409006 ZFC3H1O60293 1989 aaKnown RBP22.52■■□□□ 1.2
KDELR3-202ENST00000409006 SCN8AQ9UQD0 1980 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 DXOO77932 396 aaKnown RBP22.52■■□□□ 1.2
KDELR3-202ENST00000409006 PROSCO94903 275 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 PGLSO95336 258 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 PDHA1P08559 390 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 HOXC4P09017 264 aaPredicted RBP22.52■■□□□ 1.2
KDELR3-202ENST00000409006 CTPS1P17812 591 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 ETV3P41162 512 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 GALNT2Q10471 571 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 COL9A2Q14055 689 aaPredicted RBP22.52■■□□□ 1.2
KDELR3-202ENST00000409006 PAFAH1B3Q15102 231 aaKnown RBP22.52■■□□□ 1.2
KDELR3-202ENST00000409006 HADHQ16836 314 aaKnown RBP22.52■■□□□ 1.2
KDELR3-202ENST00000409006 ASTE1Q2TB18 679 aaPredicted RBP22.52■■□□□ 1.2
KDELR3-202ENST00000409006 ANKRD20A8PQ5CZ79 823 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 SPACA3Q8IXA5 215 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 BBS5Q8N3I7 341 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 SDR16C5Q8N3Y7 309 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 NSMCE1Q8WV22 266 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 PIH1D2Q8WWB5 315 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 NUS1Q96E22 293 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 PRR11Q96HE9 360 aaPredicted RBP22.52■■□□□ 1.2
KDELR3-202ENST00000409006 HIC2Q96JB3 615 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 ZNF578Q96N58 590 aaPredicted RBP22.52■■□□□ 1.2
KDELR3-202ENST00000409006 SEMA3CQ99985 751 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms