RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 KCNE4Q8WWG9 221 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 SCRN2Q96FV2 425 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 LIN37Q96GY3 246 aaPredicted RBP12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 CALR3Q96L12 384 aaKnown RBP12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 MAK16Q9BXY0 300 aaKnown RBP12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 RAB6CQ9H0N0 254 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 SYNDIG1Q9H7V2 258 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 CBX8Q9HC52 389 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 TRNAU1APQ9NX07 287 aaKnown RBP12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 SEPT10Q9P0V9 454 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 GULP1Q9UBP9 304 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 PTPRBP23467 1997 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 RGSL1A5PLK6 1076 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 HTRA2O43464 458 aaPredicted RBP12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 NUDT21O43809 227 aaKnown RBP12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 RARAP10276 462 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 CCNCP24863 283 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 TRIM23P36406 574 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 ARHGAP25P42331 645 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 RHDQ02161 417 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 LRP8Q14114 963 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 SLC18A3Q16572 532 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 SMTNL2Q2TAL5 461 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 ZNF765Q7L2R6 523 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 NLRP8Q86W28 1048 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 CNGA4Q8IV77 575 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 ARHGAP12Q8IWW6 846 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 CCDC42Q96M95 316 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 NAP1L5Q96NT1 182 aaPredicted RBP12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 CMKLR1Q99788 373 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 CCDC3Q9BQI4 270 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 B3GNT4Q9C0J1 378 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 THAP2Q9H0W7 228 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 GGT7Q9UJ14 662 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 MOSPD1Q9UJG1 213 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 ACTL7AQ9Y615 435 aa12.89□□□□□ -0.35
SNORD88B-201ENST00000408454 PPP1R12AO14974 1030 aaPredicted RBP12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 MAFKO60675 156 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 PROSCO94903 275 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 IPO7O95373 1038 aaKnown RBP12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 ITGA2BP08514 1039 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 JMJD7P0C870 316 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 GIMD1P0DJR0 217 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 SKILP12757 684 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 CD82P27701 267 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 HNRNPH3P31942 346 aaKnown RBP12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 DPTQ07507 201 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 ALG11Q2TAA5 492 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 LRRC73Q5JTD7 316 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 PNCKQ6P2M8 343 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 GUSBP11Q6P575 273 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 C19orf48Q6RUI8 117 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 XKR5Q6UX68 686 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 LUZP1Q86V48 1076 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 SLC35F3Q8IY50 421 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 NRSN1Q8IZ57 195 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 FAM46DQ8NEK8 389 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 PCDH19Q8TAB3 1148 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 CPLX3Q8WVH0 158 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 LRRC45Q96CN5 670 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 WBP1Q96G27 269 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 FCRL3Q96P31 734 aaPredicted RBP12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 TSGA13Q96PP4 275 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 PEBP4Q96S96 227 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 XPO4Q9C0E2 1151 aaKnown RBP12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 KLC2Q9H0B6 622 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 DPEP2Q9H4A9 486 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 PCDH18Q9HCL0 1135 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 MBNL1Q9NR56 388 aaKnown RBP12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 APPL1Q9UKG1 709 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 PCDHB11Q9Y5F2 797 aa12.88□□□□□ -0.35
SNORD88B-201ENST00000408454 IGF2RP11717 2491 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 GOLGA6CA6NDK9 693 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 GOLGA6BA6NDN3 693 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 TRAFD1O14545 582 aaPredicted RBP12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 MATN3O15232 486 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 SPINT1O43278 529 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 MTSS1O43312 755 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 HEXIM1O94992 359 aaKnown RBP12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 PGLSO95336 258 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 GOLGA6DP0CG33 693 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 AMPD1P23109 780 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 CCKBRP32239 447 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 GARSP41250 739 aaKnown RBP12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 SLC1A1P43005 524 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 GPR3P46089 330 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 GPR1P46091 355 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 INHBCP55103 352 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 SLC10A7Q0GE19 358 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 PAFAH1B3Q15102 231 aaKnown RBP12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 CA9Q16790 459 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 C14orf28Q4W4Y0 310 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 HGSNATQ68CP4 663 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 RAET1GQ6H3X3 334 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 RBFAQ8N0V3 343 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 NPWQ8N729 165 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 ZSCAN1Q8NBB4 408 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 SH3KBP1Q96B97 665 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 DTD2Q96FN9 168 aa12.87□□□□□ -0.35
SNORD88B-201ENST00000408454 FUCA2Q9BTY2 467 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms