RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CBFA2T2O43439 604 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 BRINP1O60477 761 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 RASGRP1O95267 797 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 CPP00450 1065 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 CNGA3Q16281 694 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 ANKRD20A8PQ5CZ79 823 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 VSTM4Q8IW00 320 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 BBS5Q8N3I7 341 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 TEX26Q8N6G2 289 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 LRRN4Q8WUT4 740 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 CHP1Q99653 195 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 LGR4Q9BXB1 951 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 TSPY26PQ9H489 355 aa19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 ARHGEF17Q96PE2 2063 aaPredicted RBP19.34■□□□□ 0.69
SMARCB1-204ENST00000407422 A0A087WV48 116 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 CSO75390 466 aaKnown RBP19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 CTSEP14091 401 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 GARSP41250 739 aaKnown RBP19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 GALNT2Q10471 571 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 TRIM14Q14142 442 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 PAFAH1B3Q15102 231 aaKnown RBP19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 ELOCQ15369 112 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 DENND2CQ68D51 928 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 FSTL5Q8N475 847 aaPredicted RBP19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 OR1E3Q8WZA6 343 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 COQ10AQ96MF6 247 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 DEPDC7Q96QD5 511 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 ZNF670Q9BS34 389 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 DEF6Q9H4E7 631 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 FGF22Q9HCT0 170 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 MRPL40Q9NQ50 206 aaKnown RBP19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 ABHD10Q9NUJ1 306 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 SIRPGQ9P1W8 387 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 DOLKQ9UPQ8 538 aa19.33■□□□□ 0.69
SMARCB1-204ENST00000407422 SSU72P8A0A1W2PR75 194 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 HEXIM1O94992 359 aaKnown RBP19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 PGLSO95336 258 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 LHCGRP22888 699 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 VIPR1P32241 457 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 TRIM23P36406 574 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 IHHQ14623 411 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 LRRC49Q8IUZ0 686 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 PQLC3Q8N755 202 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 CRELD1Q96HD1 420 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 SEMA3CQ99985 751 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 SPTLC3Q9NUV7 552 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 GULP1Q9UBP9 304 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 PHTF1Q9UMS5 762 aa19.33■□□□□ 0.68
SMARCB1-204ENST00000407422 A0A0U1RQS6 177 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 A0A1W2PQ67 120 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 NPIPB15A6NHN6 443 aaPredicted RBP19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 CACNB4O00305 520 aaPredicted RBP19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 AKR1B10O60218 316 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 USP12O75317 370 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 MPOP05164 745 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 PDHA1P08559 390 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 TMEM253P0C7T8 217 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 RPIAP49247 311 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 KIAA1024LP59773 190 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 GBE1Q04446 702 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 ITKQ08881 620 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 MESDQ14696 234 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 PDK2Q15119 407 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 RALGPS1Q5JS13 557 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 ESRP1Q6NXG1 681 aaKnown RBP19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 PNCKQ6P2M8 343 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 HSD11B1LQ7Z5J1 315 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 CBARPQ8N350 705 aaPredicted RBP19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 KYQ8NBH2 561 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 OR56A4Q8NGH8 313 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 GLMNQ92990 594 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 FAF2Q96CS3 445 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 SMIM14Q96QK8 99 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 ZNHIT6Q9NWK9 470 aaKnown RBP19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 PADI4Q9UM07 663 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 RAI2Q9Y5P3 530 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 DGKBQ9Y6T7 804 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 PTPRQQ9UMZ3 2332 aa19.32■□□□□ 0.68
SMARCB1-204ENST00000407422 MFAP3LO75121 409 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 TNFP01375 233 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 KRT7P08729 469 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 ALPIP09923 528 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 CTPS1P17812 591 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 ITPKBP27987 946 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 EIF2S3P41091 472 aaKnown RBP19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 ETV3P41162 512 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 ISXQ2M1V0 245 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 ARMC12Q5T9G4 340 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 TSPAN33Q86UF1 283 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 PDZD3Q86UT5 571 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 ATL2Q8NHH9 583 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 SLC35G2Q8TBE7 412 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 PIH1D2Q8WWB5 315 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 RAPGEF5Q92565 580 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 MAML1Q92585 1016 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 NUS1Q96E22 293 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 SCRN2Q96FV2 425 aa19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 RBM15Q96T37 977 aaKnown RBP eCLIP19.31■□□□□ 0.68
SMARCB1-204ENST00000407422 WDR26Q9H7D7 661 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms