RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 PCDH12Q9NPG4 1184 aa20.53■□□□□ 0.88
CHKB-201ENST00000406938 TREX1Q9NSU2 369 aa20.53■□□□□ 0.88
CHKB-201ENST00000406938 POLR3BQ9NW08 1133 aaPredicted RBP20.53■□□□□ 0.88
CHKB-201ENST00000406938 B4GALT6Q9UBX8 382 aa20.53■□□□□ 0.88
CHKB-201ENST00000406938 A0A087WUV0 522 aaPredicted RBP20.52■□□□□ 0.88
CHKB-201ENST00000406938 C1orf232A0A0U1RR37 186 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 A8MX80 341 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 PLK4O00444 970 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 MID1O15344 667 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 ADH1BP00325 375 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 ZNF140P52738 457 aaPredicted RBP20.52■□□□□ 0.88
CHKB-201ENST00000406938 FAM193AP78312 1265 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 CDKN3Q16667 212 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 ESRP1Q6NXG1 681 aaKnown RBP20.52■□□□□ 0.88
CHKB-201ENST00000406938 TRMT10BQ6PF06 316 aaKnown RBP20.52■□□□□ 0.88
CHKB-201ENST00000406938 NLRP9Q7RTR0 991 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 TSPAN33Q86UF1 283 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 TTC30BQ8N4P2 665 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 OR13J1Q8NGT2 312 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 FBF1Q8TES7 1133 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 SRPK1Q96SB4 655 aaKnown RBP20.52■□□□□ 0.88
CHKB-201ENST00000406938 NELL2Q99435 816 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 GPR63Q9BZJ6 419 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 PLAAQ9Y263 795 aa20.52■□□□□ 0.88
CHKB-201ENST00000406938 C2orf81A6NN90 581 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 PAPSS2O95340 614 aaPredicted RBP20.51■□□□□ 0.87
CHKB-201ENST00000406938 SHBGP04278 402 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 NUDT17P0C025 328 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 ADRB3P13945 408 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 LHCGRP22888 699 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 STX2P32856 288 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 NEK3P51956 506 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 RPS14P62263 151 aaKnown RBP20.51■□□□□ 0.87
CHKB-201ENST00000406938 ZXDAP98168 799 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 PTPRCAPQ14761 206 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 SMAD1Q15797 465 aaKnown RBP20.51■□□□□ 0.87
CHKB-201ENST00000406938 CNGA3Q16281 694 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 CRY1Q16526 586 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 FBXL19Q6PCT2 694 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 CRTC1Q6UUV9 634 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 ERN2Q76MJ5 926 aaKnown RBP20.51■□□□□ 0.87
CHKB-201ENST00000406938 UNC5BQ8IZJ1 945 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 AADATQ8N5Z0 425 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 OR13C4Q8NGS5 318 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 OR2W6PQ8NHA6 318 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 EID2BQ96D98 161 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 DNAJC1Q96KC8 554 aaKnown RBP20.51■□□□□ 0.87
CHKB-201ENST00000406938 SLC6A17Q9H1V8 727 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 ZFYVE1Q9HBF4 777 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 IL1RAPL1Q9NZN1 696 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 FAM169AQ9Y6X4 670 aa20.51■□□□□ 0.87
CHKB-201ENST00000406938 CHURC1-FNTBB4DL54 471 aa20.5■□□□□ 0.87
CHKB-201ENST00000406938 C5AR1P21730 350 aa20.5■□□□□ 0.87
CHKB-201ENST00000406938 NFKBIAP25963 317 aa20.5■□□□□ 0.87
CHKB-201ENST00000406938 DRD3P35462 400 aa20.5■□□□□ 0.87
CHKB-201ENST00000406938 P2RY2P41231 377 aa20.5■□□□□ 0.87
CHKB-201ENST00000406938 CNTN1Q12860 1018 aa20.5■□□□□ 0.87
CHKB-201ENST00000406938 LRRC66Q68CR7 880 aa20.5■□□□□ 0.87
CHKB-201ENST00000406938 TMPRSS6Q8IU80 811 aa20.5■□□□□ 0.87
CHKB-201ENST00000406938 PEX13Q92968 403 aa20.5■□□□□ 0.87
CHKB-201ENST00000406938 HDAC8Q9BY41 377 aa20.5■□□□□ 0.87
CHKB-201ENST00000406938 ITM2BQ9Y287 266 aa20.5■□□□□ 0.87
CHKB-201ENST00000406938 TCRBV21S2A2A0A5A6 115 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 CCL22O00626 93 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 SPINT1O43278 529 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 SASH3O75995 380 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 ALDH1A2O94788 518 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 CLDN7O95471 211 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 CYP2A6P11509 494 aaPredicted RBP20.49■□□□□ 0.87
CHKB-201ENST00000406938 PAMP19021 973 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 LPOP22079 712 aaPredicted RBP20.49■□□□□ 0.87
CHKB-201ENST00000406938 VIPR1P32241 457 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 HMGCLP35914 325 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 MMP12P39900 470 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 TMPRSS15P98073 1019 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 PDE1BQ01064 536 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 GAS6Q14393 721 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 EFTUD2Q15029 972 aaKnown RBP eCLIP20.49■□□□□ 0.877e-7■■■■□ 22.4
CHKB-201ENST00000406938 TJAP1Q5JTD0 557 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 KIAA0930Q6ICG6 404 aaPredicted RBP20.49■□□□□ 0.87
CHKB-201ENST00000406938 ERAP2Q6P179 960 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 TRIM67Q6ZTA4 783 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 DPPA4Q7L190 304 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 IQCKQ8N0W5 287 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 FLCNQ8NFG4 579 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 PJA1Q8NG27 643 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 OR4K2Q8NGD2 314 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 STYXQ8WUJ0 223 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 CERS2Q96G23 380 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 ZIM3Q96PE6 472 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 ACSS3Q9H6R3 686 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 MOCS1Q9NZB8 636 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 RABGEF1Q9UJ41 708 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 RIMKLBQ9ULI2 386 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 STK25O00506 426 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 PIAS1O75925 651 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 C1QAP02745 245 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 ARNTP27540 789 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 ARSDP51689 593 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 ACVR1Q04771 509 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms