RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 FZD6O60353 706 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 SOCS5O75159 536 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 CLDN7O95471 211 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 IL1BP01584 269 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 TRBC1P01850 177 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 CTSLP07711 333 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 PYGBP11216 843 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 LPOP22079 712 aaPredicted RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 XPAP23025 273 aaPredicted RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 PMLP29590 882 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 HNF1BP35680 557 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 GP5P40197 560 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 GRIA4P48058 902 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 CSNK1DP48730 415 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 GUCY1A3Q02108 690 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 TFF2Q03403 129 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 LAMB3Q13751 1172 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 LRRC14Q15048 493 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 EIF4HQ15056 248 aaKnown RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 TAF1AQ15573 450 aaPredicted RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 C2orf27AQ580R0 203 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 PRPF38BQ5VTL8 546 aaKnown RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 EGFLAMQ63HQ2 1017 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 KIAA0930Q6ICG6 404 aaPredicted RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 TXNDC11Q6PKC3 985 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 CYS1Q717R9 158 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 LYSMD3Q7Z3D4 306 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 TTC7BQ86TV6 843 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 TRABD2AQ86V40 505 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 STK40Q8N2I9 435 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 SERAC1Q96JX3 654 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 RANBP9Q96S59 729 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 CPNE1Q99829 537 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 PAIP2Q9BPZ3 127 aaKnown RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 SLC13A1Q9BZW2 595 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 ZFYVE1Q9HBF4 777 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 FBXO6Q9NRD1 293 aaPredicted RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 POLR3BQ9NW08 1133 aaPredicted RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 EURLQ9NYK6 297 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 PRKAG3Q9UGI9 489 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 FETUBQ9UGM5 382 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 IL36AQ9UHA7 158 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 GGT7Q9UJ14 662 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 ZNF711Q9Y462 761 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 WASF2Q9Y6W5 498 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 NCOR1O75376 2440 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 GON4LQ3T8J9 2241 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 ANKRD36A6QL64 1941 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 CCDC162PA2VCL2 907 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 NPIPB15A6NHN6 443 aaPredicted RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 ANHXE9PGG2 379 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 SIN3BO75182 1162 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 RPP40O75818 363 aaKnown RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 PAPSS2O95340 614 aaPredicted RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 GOT2P00505 430 aaKnown RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 ITGA2BP08514 1039 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 PRSS56P0CW18 603 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 TIE1P35590 1138 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 IL12RB1P42701 662 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 SLC1A2P43004 574 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 PGGT1BP53609 377 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 SEPT7Q16181 437 aaKnown RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 HNRNPA1L2Q32P51 320 aaKnown RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 PREPLQ4J6C6 727 aaPredicted RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 FSTL4Q6MZW2 842 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 USP45Q70EL2 814 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 MARK2Q7KZI7 788 aaKnown RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 TSPAN33Q86UF1 283 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 NDUFAF2Q8N183 169 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 PHTF2Q8N3S3 785 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 SLC44A3Q8N4M1 653 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 ARFGAP2Q8N6H7 521 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 ZNF513Q8N8E2 541 aaPredicted RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 GPATCH11Q8N954 259 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 STYXQ8WUJ0 223 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 CDKN2AIPNLQ96HQ2 116 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 GUCD1Q96NT3 240 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 TUBGCP5Q96RT8 1024 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 PHF7Q9BWX1 381 aaPredicted RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 CPEB1Q9BZB8 566 aaKnown RBP3.72□□□□□ -1.81
RTN4-208ENST00000404909 CAB39LQ9H9S4 337 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 PCMTD2Q9NV79 361 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 FKBPLQ9UIM3 349 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 SLC39A10Q9ULF5 831 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 PKP3Q9Y446 797 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 PIAS3Q9Y6X2 628 aa3.72□□□□□ -1.81
RTN4-208ENST00000404909 EDDM13A0A1B0GTR0 161 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 CXorf51AA0A1B0GTR3 108 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 HMX2A2RU54 273 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 SPECC1L-ADORA2AF8WAN1 911 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 PLK4O00444 970 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 CD3EAPO15446 510 aaKnown RBP3.71□□□□□ -1.82
RTN4-208ENST00000404909 GPR39O43194 453 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 NARSO43776 548 aaKnown RBP3.71□□□□□ -1.82
RTN4-208ENST00000404909 HAUS5O94927 633 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 AHSGP02765 367 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 CHN1P15882 459 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 CD72P21854 359 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 TYK2P29597 1187 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 CTHP32929 405 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms