RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 NOMO1Q15155 1222 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 LLGL1Q15334 1064 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 CFAP58Q5T655 872 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 WDR93Q6P2C0 686 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 BRAT1Q6PJG6 821 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 ZSWIM9Q86XI8 627 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 CCHCR1Q8TD31 782 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 SAP25Q8TEE9 199 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 C1orf54Q8WWF1 131 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 ASB12Q8WXK4 309 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 BMFQ96LC9 184 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 LENG8Q96PV6 779 aaPredicted RBP16.6■□□□□ 0.25
CGREF1-205ENST00000404694 KLF6Q99612 283 aaPredicted RBP16.6■□□□□ 0.25
CGREF1-205ENST00000404694 PARD6BQ9BYG5 372 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 BRD8Q9H0E9 1235 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 ATP13A3Q9H7F0 1226 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 AMACRQ9UHK6 382 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 HS3ST3A1Q9Y663 406 aa16.6■□□□□ 0.25
CGREF1-205ENST00000404694 COL5A1P20908 1838 aaPredicted RBP16.6■□□□□ 0.25
CGREF1-205ENST00000404694 CFAP69A5D8W1 941 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 POM121BA6NF01 834 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 HACD1B0YJ81 288 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 RAD51CO43502 376 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 ECEL1O95672 775 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 TOP3BO95985 862 aaKnown RBP16.59■□□□□ 0.25
CGREF1-205ENST00000404694 RHOXF2BP0C7M4 288 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 FTH1P19P0C7X4 201 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 H2AFXP16104 143 aaPredicted RBP16.59■□□□□ 0.25
CGREF1-205ENST00000404694 XPAP23025 273 aaPredicted RBP16.59■□□□□ 0.25
CGREF1-205ENST00000404694 STIP1P31948 543 aaKnown RBP16.59■□□□□ 0.25
CGREF1-205ENST00000404694 SCNN1BP51168 640 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 RENBPP51606 427 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 SUOXP51687 545 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 AP1S1P61966 158 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 DYNLT1P63172 113 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 BCL2L1Q07817 233 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 ELP6Q0PNE2 266 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 SGCGQ13326 291 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 OASLQ15646 514 aaKnown RBP16.59■□□□□ 0.25
CGREF1-205ENST00000404694 UGP2Q16851 508 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 INAVAQ3KP66 663 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 KYAT3Q6YP21 454 aaKnown RBP16.59■□□□□ 0.25
CGREF1-205ENST00000404694 PTAR1Q7Z6K3 402 aaPredicted RBP16.59■□□□□ 0.25
CGREF1-205ENST00000404694 SLC22A18ASQ8N1D0 253 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 EIF1ADQ8N9N8 165 aaKnown RBP16.59■□□□□ 0.25
CGREF1-205ENST00000404694 DENND6BQ8NEG7 585 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 FAM174AQ8TBP5 190 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 CXorf40AQ8TE69 158 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 NSMCE3Q96MG7 304 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 CDC6Q99741 560 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 RHOXF2Q9BQY4 288 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 ANKZF1Q9H8Y5 726 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 GPR27Q9NS67 375 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 R3HDM2Q9Y2K5 976 aaKnown RBP16.59■□□□□ 0.25
CGREF1-205ENST00000404694 UTP11Q9Y3A2 253 aaKnown RBP16.59■□□□□ 0.25
CGREF1-205ENST00000404694 CHD8Q9HCK8 2581 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 CEP295Q9C0D2 2601 aa16.59■□□□□ 0.25
CGREF1-205ENST00000404694 CCDC151A5D8V7 595 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 MMP20O60882 483 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 ERLIN1O75477 346 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 CR2P20023 1033 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 HSPA9P38646 679 aaKnown RBP16.58■□□□□ 0.24
CGREF1-205ENST00000404694 GARSP41250 739 aaKnown RBP16.58■□□□□ 0.24
CGREF1-205ENST00000404694 PTGIRP43119 386 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 DRG2P55039 364 aaKnown RBP16.58■□□□□ 0.24
CGREF1-205ENST00000404694 EIF3EP60228 445 aaKnown RBP16.58■□□□□ 0.24
CGREF1-205ENST00000404694 BNIP3Q12983 259 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 TMEM52BQ4KMG9 183 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 TTC27Q6P3X3 843 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 Q6ZSR6 202 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 LRRC49Q8IUZ0 686 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 IFT20Q8IY31 132 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 PGBD5Q8N414 524 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 NSMCE1Q8WV22 266 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 ECHDC3Q96DC8 303 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 FERMT1Q9BQL6 677 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 MGME1Q9BQP7 344 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 WRAP53Q9BUR4 548 aaKnown RBP16.58■□□□□ 0.24
CGREF1-205ENST00000404694 PCDH12Q9NPG4 1184 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 DNPEPQ9ULA0 475 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 ZNF148Q9UQR1 794 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 ASPMQ8IZT6 3477 aa16.58■□□□□ 0.24
CGREF1-205ENST00000404694 ACACBO00763 2458 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 TRAFD1O14545 582 aaPredicted RBP16.57■□□□□ 0.24
CGREF1-205ENST00000404694 FPGTO14772 594 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 NDC80O14777 642 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 TM7SF2O76062 418 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 TRIM16O95361 564 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 MAP3K6O95382 1288 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 RBP3P10745 1247 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 SPINK2P20155 84 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 MX2P20592 715 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 MMP12P39900 470 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 GALNT2Q10471 571 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 SNX1Q13596 522 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 PDK1Q15118 436 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 ERAP2Q6P179 960 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 KANSL1Q7Z3B3 1105 aa16.57■□□□□ 0.24
CGREF1-205ENST00000404694 MTERF4Q7Z6M4 381 aaKnown RBP16.57■□□□□ 0.24
CGREF1-205ENST00000404694 JAMLQ86YT9 394 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 357.3 ms