RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 CPEB1Q9BZB8 566 aaKnown RBP13.33□□□□□ -0.28
CEACAM1-206ENST00000403136 EBF3Q9H4W6 596 aa13.33□□□□□ -0.28
CEACAM1-206ENST00000403136 ZNF576Q9H609 170 aa13.33□□□□□ -0.28
CEACAM1-206ENST00000403136 FBXO6Q9NRD1 293 aaPredicted RBP13.33□□□□□ -0.28
CEACAM1-206ENST00000403136 CLEC1BQ9P126 229 aa13.33□□□□□ -0.28
CEACAM1-206ENST00000403136 SLC27A6Q9Y2P4 619 aa13.33□□□□□ -0.28
CEACAM1-206ENST00000403136 ATG2AQ2TAZ0 1938 aa13.33□□□□□ -0.28
CEACAM1-206ENST00000403136 A0A096LPK6 155 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 BNIP3LO60238 219 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 S1PR4O95977 384 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 TOP3BO95985 862 aaKnown RBP13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 CTPS1P17812 591 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 NNMTP40261 264 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 SERPINB4P48594 390 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 RAD51Q06609 339 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 PDGFRLQ15198 375 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 ZNF789Q5FWF6 425 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 CES5AQ6NT32 575 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 MRNIPQ6NTE8 343 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 DPY19L3Q6ZPD9 716 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 C12orf40Q86WS4 652 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 WFIKKN2Q8TEU8 576 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 MYLIPQ8WY64 445 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 E2F7Q96AV8 911 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 MRGPRX3Q96LB0 322 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 S1PR5Q9H228 398 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 SUV39H2Q9H5I1 410 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 MARCH4Q9P2E8 410 aaPredicted RBP13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 TLK1Q9UKI8 766 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 A0A0J9YYE9 177 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 FAM95CA0A1B0GW59 222 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 OTOL1A6NHN0 477 aaPredicted RBP13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 STX7O15400 261 aaKnown RBP13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 TULP3O75386 442 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 TRBC1P01850 177 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 ATP5BP06576 529 aaKnown RBP13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 GSTA1P08263 222 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 SAT1P21673 171 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 CCNHP51946 323 aaPredicted RBP13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 N4BP2L1Q5TBK1 243 aaPredicted RBP13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 C16orf46Q6P387 395 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 PIGWQ7Z7B1 504 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 SDCCAG8Q86SQ7 713 aaPredicted RBP13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 LDB1Q86U70 411 aaPredicted RBP13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 SLC41A1Q8IVJ1 513 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 MFSD6LQ8IWD5 586 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 ETFBKMTQ8IXQ9 262 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 PAF1Q8N7H5 531 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 PNPLA1Q8N8W4 532 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 CYB5D2Q8WUJ1 264 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 SORCS1Q8WY21 1168 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 GPR63Q9BZJ6 419 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 NSRP1Q9H0G5 558 aaKnown RBP13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 MANSC1Q9H8J5 431 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 ECT2Q9H8V3 914 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 CATSPERZQ9NTU4 200 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 FGFR1OP2Q9NVK5 253 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 LMCD1Q9NZU5 365 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 MYLKQ15746 1914 aa13.32□□□□□ -0.28
CEACAM1-206ENST00000403136 ASLP04424 464 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 DLDP09622 509 aaKnown RBP13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 ALPIP09923 528 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 SLC6A11P48066 632 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 CLCN5P51795 746 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 POU4F1Q01851 419 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 DMTNQ08495 405 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 ILF2Q12905 390 aaKnown RBP13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 GAB4Q2WGN9 574 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 GKAP1Q5VSY0 366 aaPredicted RBP13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 FOXR1Q6PIV2 292 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 VITQ6UXI7 678 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 Q6ZVU0 165 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 RAPH1Q70E73 1250 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 CLEC14AQ86T13 490 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 PLD6Q8N2A8 252 aaKnown RBP13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 GPATCH11Q8N954 259 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 OR2A12Q8NGT7 310 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 FRS2Q8WU20 508 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 ECHDC3Q96DC8 303 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 ELMO2Q96JJ3 720 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 ZNF641Q96N77 438 aaPredicted RBP13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 MYADMQ96S97 322 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 OMDQ99983 421 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 ELAC2Q9BQ52 826 aaKnown RBP13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 PITPNM3Q9BZ71 974 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 CIPCQ9C0C6 399 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 IL17CQ9P0M4 197 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 TMEM216Q9P0N5 145 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 EMCNQ9ULC0 261 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 PHTF1Q9UMS5 762 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 ZNF711Q9Y462 761 aa13.31□□□□□ -0.28
CEACAM1-206ENST00000403136 C2orf16Q68DN1 1984 aa13.3□□□□□ -0.28
CEACAM1-206ENST00000403136 A0A0U1RQS6 177 aa13.3□□□□□ -0.28
CEACAM1-206ENST00000403136 TTC34A8MYJ7 566 aa13.3□□□□□ -0.28
CEACAM1-206ENST00000403136 WASH3PC4AMC7 463 aa13.3□□□□□ -0.28
CEACAM1-206ENST00000403136 PLIN3O60664 434 aa13.3□□□□□ -0.28
CEACAM1-206ENST00000403136 SLC4A1P02730 911 aa13.3□□□□□ -0.28
CEACAM1-206ENST00000403136 SRPRAP08240 638 aaKnown RBP13.3□□□□□ -0.28
CEACAM1-206ENST00000403136 NEFHP12036 1026 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms