RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SLCO3A1Q9UIG8 710 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 PHGDHO43175 533 aaKnown RBP25.69■■□□□ 1.7
CPNE1-205ENST00000401607 S1PR4O95977 384 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 SLC4A1P02730 911 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 GSTA1P08263 222 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 ADH5P11766 374 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 SAT1P21673 171 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 LPOP22079 712 aaPredicted RBP25.69■■□□□ 1.7
CPNE1-205ENST00000401607 EPHB1P54762 984 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 SEMA3AQ14563 771 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 RBM20Q5T481 1227 aaKnown RBP25.69■■□□□ 1.7
CPNE1-205ENST00000401607 CEP97Q8IW35 865 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 RYBPQ8N488 228 aaPredicted RBP25.69■■□□□ 1.7
CPNE1-205ENST00000401607 MYLIPQ8WY64 445 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 NSUN3Q9H649 340 aaKnown RBP25.69■■□□□ 1.7
CPNE1-205ENST00000401607 ATP13A3Q9H7F0 1226 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 POLR3BQ9NW08 1133 aaPredicted RBP25.69■■□□□ 1.7
CPNE1-205ENST00000401607 HACD3Q9P035 362 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 PHTF1Q9UMS5 762 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 CD3EAPO15446 510 aaKnown RBP25.68■■□□□ 1.7
CPNE1-205ENST00000401607 HOXC11O43248 304 aaPredicted RBP25.68■■□□□ 1.7
CPNE1-205ENST00000401607 PROCP04070 461 aa25.68■■□□□ 1.7
CPNE1-205ENST00000401607 SLC35E2BP0CK96 405 aa25.68■■□□□ 1.7
CPNE1-205ENST00000401607 CTPS1P17812 591 aa25.68■■□□□ 1.7
CPNE1-205ENST00000401607 RPL26P61254 145 aaKnown RBP25.68■■□□□ 1.7
CPNE1-205ENST00000401607 IRX4P78413 519 aa25.68■■□□□ 1.7
CPNE1-205ENST00000401607 ANKRD54Q6NXT1 300 aa25.68■■□□□ 1.7
CPNE1-205ENST00000401607 GPATCH11Q8N954 259 aa25.68■■□□□ 1.7
CPNE1-205ENST00000401607 OR4L1Q8NH43 312 aa25.68■■□□□ 1.7
CPNE1-205ENST00000401607 ELMO2Q96JJ3 720 aa25.68■■□□□ 1.7
CPNE1-205ENST00000401607 SIRPGQ9P1W8 387 aa25.68■■□□□ 1.7
CPNE1-205ENST00000401607 RPL26L1Q9UNX3 145 aaKnown RBP25.68■■□□□ 1.7
CPNE1-205ENST00000401607 ZNF711Q9Y462 761 aa25.68■■□□□ 1.7
CPNE1-205ENST00000401607 A0A0U1RQS6 177 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 BPGMP07738 259 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 ALPIP09923 528 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 CISD3P0C7P0 127 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 ARSAP15289 507 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 CLCN5P51795 746 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 TAS2R39P59534 338 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 RAB10P61026 200 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 MYLK3Q32MK0 819 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 RAPH1Q70E73 1250 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 C12orf40Q86WS4 652 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 PCDH20Q8N6Y1 951 aaKnown RBP25.67■■□□□ 1.7
CPNE1-205ENST00000401607 CCDC197Q8NCU1 140 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 ZFYVE19Q96K21 471 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 OMDQ99983 421 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 C1QTNF1Q9BXJ1 281 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 MAGEE1Q9HCI5 957 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 CATSPERZQ9NTU4 200 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 GDE1Q9NZC3 331 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 HECAQ9UBI9 543 aaPredicted RBP25.67■■□□□ 1.7
CPNE1-205ENST00000401607 CEP290O15078 2479 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 HEPACAM2A8MVW5 462 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 BIRC5O15392 142 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 FCARP24071 287 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 ZNF460Q14592 562 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 ACCSLQ4AC99 568 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 ZSWIM9Q86XI8 627 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 ST13P5Q8NFI4 369 aaPredicted RBP25.67■■□□□ 1.7
CPNE1-205ENST00000401607 NDNQ99608 321 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 TRPV4Q9HBA0 871 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 ERVW-1Q9UQF0 538 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 ANKRD6Q9Y2G4 727 aa25.67■■□□□ 1.7
CPNE1-205ENST00000401607 ADH1CP00326 375 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 PRSS56P0CW18 603 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 STMN1P16949 149 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 POLR2EP19388 210 aaKnown RBP25.66■■□□□ 1.7
CPNE1-205ENST00000401607 OGNP20774 298 aaKnown RBP25.66■■□□□ 1.7
CPNE1-205ENST00000401607 SERPINA4P29622 427 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 POU4F1Q01851 419 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 CARD16Q5EG05 197 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 MRNIPQ6NTE8 343 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 AFTPHQ6ULP2 937 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 OTOAQ7RTW8 1153 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 EID2BQ96D98 161 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 MRGPRX3Q96LB0 322 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 OLFM1Q99784 485 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 TLK1Q9UKI8 766 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 STARD13Q9Y3M8 1113 aa25.66■■□□□ 1.7
CPNE1-205ENST00000401607 A0A0J9YYE9 177 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 KLF11O14901 512 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 TRBC1P01850 177 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 DGKGP49619 791 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 CCNHP51946 323 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-205ENST00000401607 TYSND1Q2T9J0 566 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 TAF1BQ53T94 588 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-205ENST00000401607 CES4AQ5XG92 561 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 C6orf89Q6UWU4 347 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 DPY19L3Q6ZPD9 716 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 LYSMD3Q7Z3D4 306 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 SPATA21Q7Z572 469 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 NUDCD3Q8IVD9 361 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 CCDC63Q8NA47 563 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 SORCS1Q8WY21 1168 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 GRAMD1AQ96CP6 724 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 TUBGCP5Q96RT8 1024 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 EBF3Q9H4W6 596 aa25.65■■□□□ 1.7
CPNE1-205ENST00000401607 OBP2AQ9NY56 170 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms