RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TTC24A2A3L6 582 aaPredicted RBP13.46□□□□□ -0.25
VCX3A-202ENST00000398729 LMO7DNF2Z398 122 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 HTRA2O43464 458 aaPredicted RBP13.46□□□□□ -0.25
VCX3A-202ENST00000398729 MFSD11O43934 449 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 OPA1O60313 960 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 GCATO75600 419 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 RASGRP1O95267 797 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 MT-CO3P00414 261 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 TMEM253P0C7T8 217 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 CTSEP14091 401 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 GARSP41250 739 aaKnown RBP13.46□□□□□ -0.25
VCX3A-202ENST00000398729 HK3P52790 923 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 ADKP55263 362 aaKnown RBP13.46□□□□□ -0.25
VCX3A-202ENST00000398729 MAXP61244 160 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 C1orf61Q13536 156 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 DPYSL3Q14195 570 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 PAFAH1B3Q15102 231 aaKnown RBP13.46□□□□□ -0.25
VCX3A-202ENST00000398729 ELOCQ15369 112 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 NR0B2Q15466 257 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 ATP13A4Q4VNC1 1196 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 ANKRD20A8PQ5CZ79 823 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 TIGD7Q6NT04 549 aaPredicted RBP13.46□□□□□ -0.25
VCX3A-202ENST00000398729 ENPP7Q6UWV6 458 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 LRRC69Q6ZNQ3 347 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 HID1Q8IV36 788 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 FSTL5Q8N475 847 aaPredicted RBP13.46□□□□□ -0.25
VCX3A-202ENST00000398729 DCBLD1Q8N8Z6 715 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 IFI44Q8TCB0 444 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 GLMNQ92990 594 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 CCDC42Q96M95 316 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 NSMCE3Q96MG7 304 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 ABCG4Q9H172 646 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 NOD2Q9HC29 1040 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 PNMA8BQ9ULN7 279 aaPredicted RBP13.46□□□□□ -0.25
VCX3A-202ENST00000398729 DOLKQ9UPQ8 538 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 OR1A2Q9Y585 309 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 U3KQA8 63 aa13.46□□□□□ -0.25
VCX3A-202ENST00000398729 A8MX80 341 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 CACNB4O00305 520 aaPredicted RBP13.45□□□□□ -0.26
VCX3A-202ENST00000398729 MFAP3LO75121 409 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 CPP00450 1065 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 ALPIP09923 528 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 TSHRP16473 764 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 MAN1A1P33908 653 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 RPIAP49247 311 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 TAS2R40P59535 323 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 SRP54P61011 504 aaKnown RBP13.45□□□□□ -0.26
VCX3A-202ENST00000398729 TLE3Q04726 772 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 GALNT2Q10471 571 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 MESDQ14696 234 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 ACOX1Q15067 660 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 CDKN3Q16667 212 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 ALG11Q2TAA5 492 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 C6orf132Q5T0Z8 1188 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 NCBP2-AS2Q69YL0 99 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 RD3Q7Z3Z2 195 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 CPNE8Q86YQ8 564 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 SDR16C5Q8N3Y7 309 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 TEX26Q8N6G2 289 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 PCDH19Q8TAB3 1148 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 SNIP1Q8TAD8 396 aaKnown RBP13.45□□□□□ -0.26
VCX3A-202ENST00000398729 SCG3Q8WXD2 468 aaKnown RBP13.45□□□□□ -0.26
VCX3A-202ENST00000398729 FGF11Q92914 225 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 TSACCQ96A04 125 aaPredicted RBP13.45□□□□□ -0.26
VCX3A-202ENST00000398729 WDR92Q96MX6 357 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 CHP1Q99653 195 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 BOCQ9BWV1 1114 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 CLPBQ9H078 707 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 NHEJ1Q9H9Q4 299 aaPredicted RBP13.45□□□□□ -0.26
VCX3A-202ENST00000398729 NT5MQ9NPB1 228 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 HAUS2Q9NVX0 235 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 KCTD5Q9NXV2 234 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 B4GALT6Q9UBX8 382 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 KLQ9UEF7 1012 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 PHTF1Q9UMS5 762 aa13.45□□□□□ -0.26
VCX3A-202ENST00000398729 CPED1A4D0V7 1026 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 EME2A4GXA9 379 aaPredicted RBP13.44□□□□□ -0.26
VCX3A-202ENST00000398729 YY2O15391 372 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 RRP8O43159 456 aaKnown RBP13.44□□□□□ -0.26
VCX3A-202ENST00000398729 PGLSO95336 258 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 TNFP01375 233 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 CYP2A6P11509 494 aaPredicted RBP13.44□□□□□ -0.26
VCX3A-202ENST00000398729 KELP23276 732 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 VIPR1P32241 457 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 ITKQ08881 620 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 TRAF2Q12933 501 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 IFI16Q16666 785 aaKnown RBP13.44□□□□□ -0.26
VCX3A-202ENST00000398729 ARMC12Q5T9G4 340 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 CDCP2Q5VXM1 449 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 ESRP1Q6NXG1 681 aaKnown RBP13.44□□□□□ -0.26
VCX3A-202ENST00000398729 GUSBP11Q6P575 273 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 LVRNQ6Q4G3 990 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 EFL1Q7Z2Z2 1120 aaKnown RBP13.44□□□□□ -0.26
VCX3A-202ENST00000398729 GPR155Q7Z3F1 870 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 GKN2Q86XP6 184 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 CNGA4Q8IV77 575 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 NDUFAF2Q8N183 169 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 PLA2G15Q8NCC3 412 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 SLC35G2Q8TBE7 412 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 MAPK15Q8TD08 544 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms