RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 LOXL2Q9Y4K0 774 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 C9orf172C9J069 976 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 FGF10O15520 208 aaPredicted RBP12.08□□□□□ -0.48
TFF3-202ENST00000398431 JMJD7P0C870 316 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 LIPCP11150 499 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 NSUN2Q08J23 767 aaKnown RBP eCLIP12.08□□□□□ -0.48
TFF3-202ENST00000398431 NFATC3Q12968 1075 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 SYCP1Q15431 976 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 C14orf28Q4W4Y0 310 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 PNCKQ6P2M8 343 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 XKR5Q6UX68 686 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 ZNF574Q6ZN55 896 aaPredicted RBP12.08□□□□□ -0.48
TFF3-202ENST00000398431 ARHGAP36Q6ZRI8 547 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 NRROSQ86YC3 692 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 TP53INP2Q8IXH6 220 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 MCOLN2Q8IZK6 566 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 CBARPQ8N350 705 aaPredicted RBP12.08□□□□□ -0.48
TFF3-202ENST00000398431 EXTL1Q92935 676 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 USP7Q93009 1102 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 SEMA6CQ9H3T2 930 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 SPATS2LQ9NUQ6 558 aaKnown RBP12.08□□□□□ -0.48
TFF3-202ENST00000398431 FOXJ2Q9P0K8 574 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 ST14Q9Y5Y6 855 aa12.08□□□□□ -0.48
TFF3-202ENST00000398431 TTC24A2A3L6 582 aaPredicted RBP12.07□□□□□ -0.48
TFF3-202ENST00000398431 LRRC10BA6NIK2 292 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 A8MX80 341 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 NUDT21O43809 227 aaKnown RBP12.07□□□□□ -0.48
TFF3-202ENST00000398431 PALMO75781 387 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 ITGB2P05107 769 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 FGF1P05230 155 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 HTR7P34969 479 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 ARSDP51689 593 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 COPB1P53618 953 aaKnown RBP12.07□□□□□ -0.48
TFF3-202ENST00000398431 TPI1P60174 286 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 NFKB2Q00653 900 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 C16orf72Q14CZ0 275 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 CCDC183Q5T5S1 534 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 SPECC1LQ69YQ0 1117 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 ACAD10Q6JQN1 1059 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 DNAJC24Q6P3W2 148 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 CYP4V2Q6ZWL3 525 aaPredicted RBP12.07□□□□□ -0.48
TFF3-202ENST00000398431 DPPA4Q7L190 304 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 APTXQ7Z2E3 356 aaKnown RBP12.07□□□□□ -0.48
TFF3-202ENST00000398431 VASH2Q86V25 355 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 GPBAR1Q8TDU6 330 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 PTCD2Q8WV60 388 aaKnown RBP12.07□□□□□ -0.48
TFF3-202ENST00000398431 HTR3CQ8WXA8 447 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 TMEM159Q96B96 161 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 COQ10AQ96MF6 247 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 PEBP4Q96S96 227 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 SYT11Q9BT88 431 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 DPEP2Q9H4A9 486 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 ATP13A3Q9H7F0 1226 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 CYP4F12Q9HCS2 524 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 RTN4Q9NQC3 1192 aaKnown RBP12.07□□□□□ -0.48
TFF3-202ENST00000398431 WDR70Q9NW82 654 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 TAS2R14Q9NYV8 317 aa12.07□□□□□ -0.48
TFF3-202ENST00000398431 ARHGAP42A6NI28 874 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 B4DGG1 531 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 CACNB4O00305 520 aaPredicted RBP12.06□□□□□ -0.48
TFF3-202ENST00000398431 TERTO14746 1132 aaKnown RBP12.06□□□□□ -0.48
TFF3-202ENST00000398431 CEACAM5P06731 702 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 CCL4P13236 92 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 ERCC2P18074 760 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 SERPINA4P29622 427 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 OR1D5P58170 312 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 CYP4F2P78329 520 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 BCL2L1Q07817 233 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 MAMLD1Q13495 774 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 ARHGEF7Q14155 803 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 TBR1Q16650 682 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 FKBP15Q5T1M5 1219 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 CFAP58Q5T655 872 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 ERMARDQ5T6L9 678 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 CAVIN1Q6NZI2 390 aaKnown RBP12.06□□□□□ -0.48
TFF3-202ENST00000398431 ZNF438Q7Z4V0 828 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 IRF2BP2Q7Z5L9 587 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 NPWQ8N729 165 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 KCTD15Q96SI1 283 aaPredicted RBP12.06□□□□□ -0.48
TFF3-202ENST00000398431 CMKLR1Q99788 373 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 SEMA3CQ99985 751 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 RDH14Q9HBH5 336 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 LIMA1Q9UHB6 759 aaKnown RBP12.06□□□□□ -0.48
TFF3-202ENST00000398431 IL17BQ9UHF5 180 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 AP4E1Q9UPM8 1137 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 PCDHGA4Q9Y5G9 962 aa12.06□□□□□ -0.48
TFF3-202ENST00000398431 SDK2Q58EX2 2172 aa12.05□□□□□ -0.48
TFF3-202ENST00000398431 A0A1W2PQC6 194 aa12.05□□□□□ -0.48
TFF3-202ENST00000398431 PRSS38A1L453 326 aa12.05□□□□□ -0.48
TFF3-202ENST00000398431 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.05□□□□□ -0.48
TFF3-202ENST00000398431 EEF2KO00418 725 aaKnown RBP12.05□□□□□ -0.48
TFF3-202ENST00000398431 ARHGAP6O43182 974 aa12.05□□□□□ -0.48
TFF3-202ENST00000398431 TEX33O43247 280 aa12.05□□□□□ -0.48
TFF3-202ENST00000398431 SUV39H1O43463 412 aa12.05□□□□□ -0.48
TFF3-202ENST00000398431 HTRA2O43464 458 aaPredicted RBP12.05□□□□□ -0.48
TFF3-202ENST00000398431 PEX11BO96011 259 aa12.05□□□□□ -0.48
TFF3-202ENST00000398431 ELFN1P0C7U0 828 aa12.05□□□□□ -0.48
TFF3-202ENST00000398431 FAM87AP0C7U9 286 aa12.05□□□□□ -0.48
TFF3-202ENST00000398431 CCNB1P14635 433 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms