RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 TSPAN11A1L157 253 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 IRF1P10914 325 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 SLC8A1P32418 973 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 CSKP41240 450 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 ATP4BP51164 291 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 GLT6D1Q7Z4J2 308 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 NKAPQ8N5F7 415 aaKnown RBP7.4□□□□□ -1.22
RGPD1-201ENST00000398193 PDLIM5Q96HC4 596 aaKnown RBP7.4□□□□□ -1.22
RGPD1-201ENST00000398193 ZNF641Q96N77 438 aaPredicted RBP7.4□□□□□ -1.22
RGPD1-201ENST00000398193 CYP2S1Q96SQ9 504 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 CDCA3Q99618 268 aaPredicted RBP7.4□□□□□ -1.22
RGPD1-201ENST00000398193 TCF25Q9BQ70 676 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 KLC4Q9NSK0 619 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 HEY2Q9UBP5 337 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 HSPA4LO95757 839 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 PYGLP06737 847 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 MRPL19P49406 292 aaKnown RBP7.4□□□□□ -1.23
RGPD1-201ENST00000398193 SGSHP51688 502 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 RHOAP61586 193 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 MPP1Q00013 466 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 CNGA3Q16281 694 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 EFL1Q7Z2Z2 1120 aaKnown RBP7.4□□□□□ -1.23
RGPD1-201ENST00000398193 CENPLQ8N0S6 344 aaPredicted RBP7.4□□□□□ -1.23
RGPD1-201ENST00000398193 CFAP52Q8N1V2 620 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 TTC30BQ8N4P2 665 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 TDRD5Q8NAT2 981 aaKnown RBP7.4□□□□□ -1.23
RGPD1-201ENST00000398193 KLHL29Q96CT2 875 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 PIH1D1Q9NWS0 290 aaKnown RBP7.4□□□□□ -1.23
RGPD1-201ENST00000398193 CFAP97Q9P2B7 532 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 SLC17A6Q9P2U8 582 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 HS3ST2Q9Y278 367 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 DNAJC16Q9Y2G8 782 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 SMIM24O75264 130 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 ASLP04424 464 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 RPL14P50914 215 aaKnown RBP7.4□□□□□ -1.23
RGPD1-201ENST00000398193 RPS24P62847 133 aaKnown RBP7.4□□□□□ -1.23
RGPD1-201ENST00000398193 E2F5Q15329 346 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 SNCBQ16143 134 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 PRSS36Q5K4E3 855 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 ARMC12Q5T9G4 340 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 C16orf59Q7L2K0 433 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 RAB44Q7Z6P3 723 aaPredicted RBP7.4□□□□□ -1.23
RGPD1-201ENST00000398193 PCDH20Q8N6Y1 951 aaKnown RBP7.4□□□□□ -1.23
RGPD1-201ENST00000398193 BTBD10Q9BSF8 475 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 NDE1Q9NXR1 346 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 VPS28Q9UK41 221 aa7.4□□□□□ -1.23
RGPD1-201ENST00000398193 OAS3Q9Y6K5 1087 aaKnown RBP7.4□□□□□ -1.23
RGPD1-201ENST00000398193 KIF26AQ9ULI4 1882 aaPredicted RBP7.39□□□□□ -1.23
RGPD1-201ENST00000398193 EIF3FO00303 357 aaPredicted RBP7.39□□□□□ -1.23
RGPD1-201ENST00000398193 MAGEC1O60732 1142 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 VPS4BO75351 444 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 SRPRAP08240 638 aaKnown RBP7.39□□□□□ -1.23
RGPD1-201ENST00000398193 PTGER3P43115 390 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 PPM1JQ5JR12 505 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 MTDHQ86UE4 582 aaKnown RBP7.39□□□□□ -1.23
RGPD1-201ENST00000398193 MFSD6LQ8IWD5 586 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 CMTM8Q8IZV2 173 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 ARL14EPQ8N8R7 260 aaPredicted RBP7.39□□□□□ -1.23
RGPD1-201ENST00000398193 KDM1BQ8NB78 822 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 ZBED2Q9BTP6 218 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 C1QTNF3Q9BXJ4 246 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 ATP13A3Q9H7F0 1226 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 ZNF711Q9Y462 761 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 A0A0G2JND7 137 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 RGSL1A5PLK6 1076 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 SYCE1LA8MT33 242 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 ANKRD66B4E2M5 251 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 CLASP2O75122 1294 aaKnown RBP7.39□□□□□ -1.23
RGPD1-201ENST00000398193 CD160O95971 181 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 PCSK2P16519 638 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 MAXP61244 160 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 SNRPD1P62314 119 aaKnown RBP7.39□□□□□ -1.23
RGPD1-201ENST00000398193 IRF9Q00978 393 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 CYB5D1Q6P9G0 228 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 GAREM2Q75VX8 874 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 C10orf67Q8IYJ2 551 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 ACTRT2Q8TDY3 377 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 HDAC10Q969S8 669 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 CDKN2AIPNLQ96HQ2 116 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 SCYL1Q96KG9 808 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 CCT7Q99832 543 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 ALG13Q9NP73 1137 aaKnown RBP7.39□□□□□ -1.23
RGPD1-201ENST00000398193 LATS2Q9NRM7 1088 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 NCKIPSDQ9NZQ3 722 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 MTCL1Q9Y4B5 1905 aaKnown RBP7.39□□□□□ -1.23
RGPD1-201ENST00000398193 CBX4O00257 560 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 FCHO1O14526 889 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 ZNF195O14628 629 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 KLK8O60259 260 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 PRLP01236 227 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 IDH3AP50213 366 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 AQP5P55064 265 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 RAD51Q06609 339 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 TUBB3Q13509 450 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 ZNF77Q15935 545 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 GRAMD4Q6IC98 578 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 RNF165Q6ZSG1 346 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 CMC1Q7Z7K0 106 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 LRIG1Q96JA1 1093 aa7.39□□□□□ -1.23
RGPD1-201ENST00000398193 MECRQ9BV79 373 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms