RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PUS10Q3MIT2 529 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 TXNDC11Q6PKC3 985 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 PACS1Q6VY07 963 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 GLT6D1Q7Z4J2 308 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 EXOC3L1Q86VI1 746 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 PPM1EQ8WY54 764 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 SCRN2Q96FV2 425 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 CPNE1Q99829 537 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 MFSD1Q9H3U5 465 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 C8orf33Q9H7E9 229 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 PPANQ9NQ55 473 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 NSMCE4AQ9NXX6 385 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 GGT7Q9UJ14 662 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 ZNF711Q9Y462 761 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 PLXNB3Q9ULL4 1909 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 VCANP13611 3396 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 C2orf81A6NN90 581 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 K7EQS6 105 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 LEFTY1O75610 366 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 RPP40O75818 363 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 GLULP15104 373 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 CNTFP26441 200 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 HMGCLP35914 325 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 ABL2P42684 1182 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 IL12RB1P42701 662 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 KIR2DL1P43626 348 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 ELAVL3Q14576 367 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 EGFLAMQ63HQ2 1017 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 PTCRAQ6ISU1 281 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 SERPINA13PQ6UXR4 307 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 LMNTD2Q8IXW0 634 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 ZNF366Q8N895 744 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 TMIEQ8NEW7 156 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 GRIN3AQ8TCU5 1115 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 MRRFQ96E11 262 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 SGSM3Q96HU1 749 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 DNAJC1Q96KC8 554 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 KLHL32Q96NJ5 620 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 AGAP2Q99490 1192 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 FAM167BQ9BTA0 163 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 SENP1Q9P0U3 644 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 SLC17A6Q9P2U8 582 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 PLXNA2O75051 1894 aa19.53■□□□□ 0.72
PDLIM2-205ENST00000397761 IQANK1A0A1B0GTG1 560 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 HMX2A2RU54 273 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 H7C0S8 307 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 ALPIP09923 528 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 HLA-EP13747 358 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 CTPS1P17812 591 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 HNF1BP35680 557 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 GP5P40197 560 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 CSE1LP55060 971 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 POLR2LP62875 67 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 PTPRRQ15256 657 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 ZNF805Q5CZA5 627 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 ARSIQ5FYB1 569 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 TMEM196Q5HYL7 178 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 GALNT7Q86SF2 657 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 NDUFAF2Q8N183 169 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 OR13C4Q8NGS5 318 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 KCNV2Q8TDN2 545 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 HDAC10Q969S8 669 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 EID2BQ96D98 161 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 SLC2A4RGQ9NR83 387 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 IARS2Q9NSE4 1012 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 IL17CQ9P0M4 197 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 SUN2Q9UH99 717 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 PPM1HQ9ULR3 514 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 PIAS3Q9Y6X2 628 aa19.52■□□□□ 0.72
PDLIM2-205ENST00000397761 ANTXRLA6NF34 631 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 LOC730098B7Z3J9 87 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 KRT37O76014 449 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 KRT38O76015 456 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 PRNPP04156 253 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 GRTP1Q5TC63 336 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 LGSNQ5TDP6 509 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 NEPROQ6NW34 567 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 KIAA0408Q6ZU52 694 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 LYSMD3Q7Z3D4 306 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 OR4K2Q8NGD2 314 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 GPR150Q8NGU9 434 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 CALML6Q8TD86 181 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 OR8D1Q8WZ84 308 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 MTBPQ96DY7 904 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 CDKN2AIPNLQ96HQ2 116 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 TBATAQ96M53 351 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 FAM129BQ96TA1 746 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 ACOX2Q99424 681 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 RBBP8Q99708 897 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 FAM50BQ9Y247 325 aa19.51■□□□□ 0.71
PDLIM2-205ENST00000397761 NPIPB15A6NHN6 443 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 ASGR2P07307 311 aa19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 SNRPAP09012 282 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 NR1D1P20393 614 aa19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 PFKPQ01813 784 aa19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 DNAJC3Q13217 504 aa19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 PTPRCAPQ14761 206 aa19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 UGP2Q16851 508 aa19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 TPRG1Q6ZUI0 275 aa19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 USP45Q70EL2 814 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms