RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 KBTBD2Q8IY47 623 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 LIX1Q8N485 282 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 ZMIZ2Q8NF64 920 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 KBTBD7Q8WVZ9 684 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 XAGE5Q8WWM1 108 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 NELL1Q92832 810 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 TEFMQ96QE5 360 aaKnown RBP7.21□□□□□ -1.26
UPF2-203ENST00000397053 AARSD1Q9BTE6 412 aaKnown RBP7.21□□□□□ -1.26
UPF2-203ENST00000397053 C1QTNF1Q9BXJ1 281 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 FAM192AQ9GZU8 254 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 CRTAC1Q9NQ79 661 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 UBAP1Q9NZ09 502 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 ARMCX1Q9P291 453 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 ASTN2O75129 1339 aaPredicted RBP7.21□□□□□ -1.26
UPF2-203ENST00000397053 ATXN2Q99700 1313 aaKnown RBP7.21□□□□□ -1.26
UPF2-203ENST00000397053 TTC37Q6PGP7 1564 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 FAM25EA8MYX2 175 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 SLC35G6P0C7Q6 338 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 RPL14P50914 215 aaKnown RBP7.21□□□□□ -1.26
UPF2-203ENST00000397053 PSMD7P51665 324 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 ARFIP1P53367 373 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 NAA20P61599 178 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 TAF10Q12962 218 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 PLA2G4EQ3MJ16 856 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 TCHHL1Q5QJ38 904 aaPredicted RBP7.21□□□□□ -1.26
UPF2-203ENST00000397053 DACT2Q5SW24 774 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 FNBP1LQ5T0N5 605 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 CYB5D1Q6P9G0 228 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 SCIMPQ6UWF3 145 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 IZUMO2Q6UXV1 221 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 ARHGAP36Q6ZRI8 547 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 GPRIN3Q6ZVF9 776 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 CHST9Q7L1S5 443 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 LPCAT2Q7L5N7 544 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 OTOP1Q7RTM1 612 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 TMPRSS6Q8IU80 811 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 MAP4K3Q8IVH8 894 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 ARHGEF19Q8IW93 802 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 UNC5BQ8IZJ1 945 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 DEPDC4Q8N2C3 294 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 ANKRD52Q8NB46 1076 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 ABCG8Q9H221 673 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 PRDM12Q9H4Q4 367 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 MCUBQ9NWR8 336 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 LEF1Q9UJU2 399 aaPredicted RBP7.21□□□□□ -1.26
UPF2-203ENST00000397053 PCDHGB5Q9Y5G0 923 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 AK9Q5TCS8 1911 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 C1RP00736 705 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 FGF1P05230 155 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 HSD3B2P26439 372 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 HECTD2Q5U5R9 776 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 ANXA8L1Q5VT79 327 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 SPESP1Q6UW49 350 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 CDH24Q86UP0 819 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 JAZF1Q86VZ6 243 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 IFNL1Q8IU54 200 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 MPP5Q8N3R9 675 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 C2orf73Q8N5S3 287 aaPredicted RBP7.21□□□□□ -1.26
UPF2-203ENST00000397053 SLC4A11Q8NBS3 891 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 ATAD1Q8NBU5 361 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 ZNF398Q8TD17 642 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 MYO19Q96H55 970 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 SHDQ96IW2 340 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 TMEM134Q9H6X4 195 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 KCNQ5Q9NR82 932 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 RHBDL2Q9NX52 303 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 DUS2Q9NX74 493 aaKnown RBP7.21□□□□□ -1.26
UPF2-203ENST00000397053 EHD3Q9NZN3 535 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 NCDNQ9UBB6 729 aa7.21□□□□□ -1.26
UPF2-203ENST00000397053 RFXANKO14593 260 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 HAT1O14929 419 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 ATG13O75143 517 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 LRATO95237 230 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 PPIBP23284 216 aaKnown RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 ADRA1DP25100 572 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 CMPK1P30085 196 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 SLC7A1P30825 629 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 SEC13P55735 322 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 ATP6V0D1P61421 351 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 PLGLB1Q02325 96 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 VPS26BQ4G0F5 336 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 FIGNQ5HY92 759 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 ZNF549Q6P9A3 640 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 VITQ6UXI7 678 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 ZCCHC23Q6ZST2 131 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 UBE2R2Q712K3 238 aaPredicted RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 PCDH20Q8N6Y1 951 aaKnown RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 SETD7Q8WTS6 366 aaKnown RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 APOPT1Q96IL0 206 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 DPYSL5Q9BPU6 564 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 DGCR6LQ9BY27 220 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 SEMA6BQ9H3T3 888 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 CHMP1AQ9HD42 196 aaPredicted RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 IKZF3Q9UKT9 509 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 MGAT4AQ9UM21 535 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 CAPN6Q9Y6Q1 641 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 A0A1W2PQ67 120 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 FPGTO14772 594 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 UBXN7O94888 489 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 RARAP10276 462 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms