RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 PNPT1Q8TCS8 783 aaKnown RBP17.47■□□□□ 0.39
MCF2L-208ENST00000397030 FPGTO14772 594 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 SCGNO76038 276 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 CMPK1P30085 196 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 GDI1P31150 447 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 CARTPTQ16568 116 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 CCNYL2Q5T2Q4 361 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 C9orf57Q5W0N0 161 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 TTI2Q6NXR4 508 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 OR5T3Q8NGG3 340 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 FBXO25Q8TCJ0 367 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 DPYSL5Q9BPU6 564 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 C3orf14Q9HBI5 128 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 ADGRA3Q8IWK6 1321 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 SEMA5AQ13591 1074 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 OLFML2AQ68BL7 652 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 DUPD1Q68J44 220 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 FBXO42Q6P3S6 717 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 ZNF549Q6P9A3 640 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 DNAJB14Q8TBM8 379 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 PHF10Q8WUB8 498 aaKnown RBP17.47■□□□□ 0.39
MCF2L-208ENST00000397030 LCN9Q8WX39 176 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 APOPT1Q96IL0 206 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 ARMCX1Q9P291 453 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 CLEC4AQ9UMR7 237 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 BTBD3Q9Y2F9 522 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 PCDHGB3Q9Y5G1 929 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 IQGAP3Q86VI3 1631 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 DCXO43602 365 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 CDC42P60953 191 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 SLC13A2Q13183 592 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 UNC5AQ6ZN44 842 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 SLC24A2Q9UI40 661 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 MTF2Q9Y483 593 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-208ENST00000397030 TFEBP19484 476 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 SLC7A2P52569 658 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 RABGGTBP53611 331 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 CLN6Q9NWW5 311 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 FCF1Q9Y324 198 aaKnown RBP17.47■□□□□ 0.39
MCF2L-208ENST00000397030 POLR3HQ9Y535 204 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-208ENST00000397030 GLYATL1P3A0A0U1RQE8 302 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 CYP3A4P08684 503 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 AVPR1BP47901 424 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 SLC20A2Q08357 652 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 NFATC2Q13469 925 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 SLC24A5Q71RS6 500 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 BEND5Q7L4P6 421 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 AP2M1Q96CW1 435 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 FCRL2Q96LA5 508 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-208ENST00000397030 ERVW-1Q9UQF0 538 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 KCNE2Q9Y6J6 123 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 ABCA6Q8N139 1617 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 CTBP1Q13363 440 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 PLPPR4Q7Z2D5 763 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 AIF1LQ9BQI0 150 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 GPC6Q9Y625 555 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-208ENST00000397030 PXDNLA1KZ92 1463 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 MTRF1O75570 445 aaKnown RBP17.46■□□□□ 0.39
MCF2L-208ENST00000397030 RPL22P35268 128 aaKnown RBP17.46■□□□□ 0.39
MCF2L-208ENST00000397030 TCEAL6Q6IPX3 200 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 CHERPQ8IWX8 916 aaKnown RBP17.46■□□□□ 0.39
MCF2L-208ENST00000397030 PANX1Q96RD7 426 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 IL25Q9H293 177 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 CRISPLD1Q9H336 500 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 NMUR1Q9HB89 426 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 SLC40A1Q9NP59 571 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.46■□□□□ 0.39
MCF2L-208ENST00000397030 MCUBQ9NWR8 336 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 TRIM3O75382 744 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-208ENST00000397030 ADRB2P07550 413 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 ATP4AP20648 1035 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 ZCWPW2Q504Y3 356 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 IZUMO2Q6UXV1 221 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 AUTS2Q8WXX7 1259 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 BSNDQ8WZ55 320 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 PRCCQ92733 491 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-208ENST00000397030 RASSF1Q9NS23 344 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 PHF11Q9UIL8 331 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 IKZF2Q9UKS7 526 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 ZNF208O43345 1280 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 CYP2C18P33260 490 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 ELP6Q0PNE2 266 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 FRG1Q14331 258 aaKnown RBP17.46■□□□□ 0.39
MCF2L-208ENST00000397030 SEC23AQ15436 765 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 LSM12Q3MHD2 195 aaKnown RBP17.46■□□□□ 0.39
MCF2L-208ENST00000397030 TAPT1Q6NXT6 567 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 SNX20Q7Z614 316 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 ANKRD52Q8NB46 1076 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 KCTD4Q8WVF5 259 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 SRMSQ9H3Y6 488 aa17.46■□□□□ 0.39
MCF2L-208ENST00000397030 CLDN4O14493 209 aa17.45■□□□□ 0.38
MCF2L-208ENST00000397030 PAPSS1O43252 624 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-208ENST00000397030 STX11O75558 287 aa17.45■□□□□ 0.38
MCF2L-208ENST00000397030 TRAF3Q13114 568 aa17.45■□□□□ 0.38
MCF2L-208ENST00000397030 NPAS4Q8IUM7 802 aa17.45■□□□□ 0.38
MCF2L-208ENST00000397030 ADAMTS15Q8TE58 950 aa17.45■□□□□ 0.38
MCF2L-208ENST00000397030 HDAC10Q969S8 669 aa17.45■□□□□ 0.38
MCF2L-208ENST00000397030 NMD3Q96D46 503 aaKnown RBP17.45■□□□□ 0.38
MCF2L-208ENST00000397030 CDRT15Q96T59 188 aa17.45■□□□□ 0.38
MCF2L-208ENST00000397030 TAPBPLQ9BX59 468 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms