RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SMG5Q9UPR3 1016 aaKnown RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 ZNF711Q9Y462 761 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 A0A0U1RQS6 177 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 CAPN8A6NHC0 703 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 MT-ND3P03897 115 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 ATP5BP06576 529 aaKnown RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 ALPIP09923 528 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 PYGBP11216 843 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 SERPINA4P29622 427 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 RPA3P35244 121 aaPredicted RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 HNF1BP35680 557 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 MPP1Q00013 466 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 SEMA3AQ14563 771 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 LGSNQ5TDP6 509 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 KIAA0408Q6ZU52 694 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 CDKN2AIPNLQ96HQ2 116 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 SMC6Q96SB8 1091 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 GPR22Q99680 433 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 TRMT61BQ9BVS5 477 aaKnown RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 CCDC134Q9H6E4 229 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 SUDS3Q9H7L9 328 aaPredicted RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 HACD3Q9P035 362 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 IL17CQ9P0M4 197 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 MARCH4Q9P2E8 410 aaPredicted RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 MTO1Q9Y2Z2 717 aaKnown RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 PLXNB3Q9ULL4 1909 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 CCDC162PA2VCL2 907 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 ANTXRLA6NF34 631 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 FAM47DPA6NHR8 397 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 BUD23O43709 281 aaKnown RBP12.74□□□□□ -0.37
TRIM39-204ENST00000396548 SPAG7O75391 227 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 GOT2P00505 430 aaKnown RBP12.74□□□□□ -0.37
TRIM39-204ENST00000396548 WDR4P57081 412 aaKnown RBP12.74□□□□□ -0.37
TRIM39-204ENST00000396548 KDSRQ06136 332 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 CTBP1Q13363 440 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 LMNTD2Q8IXW0 634 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 HCAR2Q8TDS4 363 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 ALKBH8Q96BT7 664 aaKnown RBP12.74□□□□□ -0.37
TRIM39-204ENST00000396548 SELENOSQ9BQE4 189 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 MTG2Q9H4K7 406 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 GRID1Q9ULK0 1009 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 PRUNE2Q8WUY3 3088 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 OR51F1A6NGY5 319 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 GAPDHSO14556 408 aaPredicted RBP12.74□□□□□ -0.37
TRIM39-204ENST00000396548 ASMTLO95671 621 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 LPOP22079 712 aaPredicted RBP12.74□□□□□ -0.37
TRIM39-204ENST00000396548 IGFBP4P22692 258 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 HMGCLP35914 325 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 ETV4P43268 484 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 XIAPP98170 497 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 PEX6Q13608 980 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 ENPP2Q13822 863 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 ITPRIPL2Q3MIP1 535 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 ACCSLQ4AC99 568 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 ZNF789Q5FWF6 425 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 C9orf64Q5T6V5 341 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 CDHR3Q6ZTQ4 885 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 YAF2Q8IY57 180 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 DCLK2Q8N568 766 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 TTC8Q8TAM2 541 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 ACMSDQ8TDX5 336 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 PDCD6IPQ8WUM4 868 aaKnown RBP12.74□□□□□ -0.37
TRIM39-204ENST00000396548 SCRN2Q96FV2 425 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 APOPT1Q96IL0 206 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 KLF6Q99612 283 aaPredicted RBP12.74□□□□□ -0.37
TRIM39-204ENST00000396548 CIPCQ9C0C6 399 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 RHOJQ9H4E5 214 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
TRIM39-204ENST00000396548 POLR3BQ9NW08 1133 aaPredicted RBP12.74□□□□□ -0.37
TRIM39-204ENST00000396548 PHTF1Q9UMS5 762 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 STARD13Q9Y3M8 1113 aa12.74□□□□□ -0.37
TRIM39-204ENST00000396548 C2orf81A6NN90 581 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 S1PR4O95977 384 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 CTPS1P17812 591 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 SPRP35270 261 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-204ENST00000396548 PDE1BQ01064 536 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 TYSND1Q2T9J0 566 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 TTC19Q6DKK2 380 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-204ENST00000396548 GDPD4Q6W3E5 623 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 OR4K2Q8NGD2 314 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 EZH1Q92800 747 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-204ENST00000396548 HEPHQ9BQS7 1158 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 ZDHHC6Q9H6R6 413 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 FBXO5Q9UKT4 447 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 PLXNA2O75051 1894 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 GOLGA8RI6L899 631 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 TPP1O14773 563 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 HAUS5O94927 633 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 DHRS4L1P0CG22 281 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 PPARDQ03181 441 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 PDE1CQ14123 709 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-204ENST00000396548 ZNF470Q6ECI4 717 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 LYSMD3Q7Z3D4 306 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 VPS39Q96JC1 886 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 TRPV5Q9NQA5 729 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 THAP10Q9P2Z0 257 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-204ENST00000396548 NPIPB15A6NHN6 443 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-204ENST00000396548 SRRM3A6NNA2 597 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-204ENST00000396548 A6NNZ2 444 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 C2CD4DB7Z1M9 353 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms