RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 HTATIP2Q9BUP3 242 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ACSS3Q9H6R3 686 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 KCTD5Q9NXV2 234 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 AP5Z1O43299 807 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 KRT33AO76009 404 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 OGNP20774 298 aaKnown RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 GSSP48637 474 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 CRADDP78560 199 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 CDK18Q07002 472 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 RGS21Q2M5E4 152 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 TEX44Q53QW1 395 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 C16orf46Q6P387 395 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 CXXC5Q7LFL8 322 aaKnown RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 FERD3LQ96RJ6 166 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 HSD17B14Q9BPX1 270 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 TBC1D10AQ9BXI6 508 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 TM6SF2Q9BZW4 377 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 RHOJQ9H4E5 214 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 SNX15Q9NRS6 342 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 MBD2Q9UBB5 411 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 GMPPBQ9Y5P6 360 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 DNAJA2O60884 412 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 MMP3P08254 477 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ADSSP30520 456 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 RASSF5Q8WWW0 418 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 SLC4A5Q9BY07 1137 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 LRMDAQ9H2I8 198 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 DDX18Q9NVP1 670 aaKnown RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 SSR3Q9UNL2 185 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 VWA7Q9Y334 891 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 LMO7Q8WWI1 1683 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 DHRS12A0PJE2 317 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 PER2O15055 1255 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 CBX6O95503 412 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 LDOC1O95751 146 aaPredicted RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 COX4I1P13073 169 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 MMP8P22894 467 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 MYL9P24844 172 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 TAS2R41P59536 307 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 IRF2BP2Q7Z5L9 587 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 IRGQQ8WZA9 623 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 VPS35Q96QK1 796 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 PCDH12Q9NPG4 1184 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ZNF214Q9UL59 606 aaPredicted RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 GSAPA4D1B5 854 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 DNTTP04053 509 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ARF4P18085 180 aaPredicted RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 CRHR1P34998 444 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 PHYKPLQ8IUZ5 450 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 TEX47Q8TBZ9 253 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 BAP1Q92560 729 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ZBTB10Q96DT7 871 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 LINGO1Q96FE5 620 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 C3orf14Q9HBI5 128 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 USP20Q9Y2K6 914 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 CNTNAP1P78357 1384 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 LOC100506127A0A0U1RQW1 187 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 TCRBV9S1A1TA0A576 114 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 TRIM38O00635 465 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 PEX11AO75192 247 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 CERS6Q6ZMG9 384 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 TTPALQ9BTX7 342 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 CCNB1IP1Q9NPC3 277 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 COMMD9Q9P000 198 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 TRAF6Q9Y4K3 522 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 CCDC182A6NF36 153 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 CLDN5O00501 218 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 ALOX15BO15296 676 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 FGFR3P22607 806 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 MC4RP32245 332 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 EIF2B2P49770 351 aaKnown RBP5.46□□□□□ -1.53
VPS13C-204ENST00000395898 PFKPQ01813 784 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 TSHZ1Q6ZSZ6 1077 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 TBC1D21Q8IYX1 336 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 SRFBP1Q8NEF9 429 aaKnown RBP5.46□□□□□ -1.53
VPS13C-204ENST00000395898 MAGEL2Q9UJ55 1249 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 COG5Q9UP83 839 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 OR10H1Q9Y4A9 318 aa5.46□□□□□ -1.53
VPS13C-204ENST00000395898 MAP2K7O14733 419 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 SLC22A3O75751 556 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 IFNGP01579 166 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 FGBP02675 491 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 CYP3A5P20815 502 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 CAPGP40121 348 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 GMFBP60983 142 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 XIAPP98170 497 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 GALNT3Q14435 633 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PSMD5Q16401 504 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ARHGAP36Q6ZRI8 547 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 TNS4Q8IZW8 715 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 TSPAN14Q8NG11 270 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 P2RY11Q96G91 374 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 NDNQ99608 321 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 TAS2R14Q9NYV8 317 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 MAGEB3O15480 346 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 SHBGP04278 402 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ADRB2P07550 413 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 SPATA31C1P0DKV0 1188 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 TPSB2P20231 275 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms