RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 ERGIC3Q9Y282 383 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 ZNF510Q9Y2H8 683 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 RFXANKO14593 260 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 TUSC3Q13454 348 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 CPSF6Q16630 551 aaKnown RBP eCLIP17.39■□□□□ 0.37
UBFD1-201ENST00000395878 RGS21Q2M5E4 152 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 KCTD21Q4G0X4 260 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 PMF1Q6P1K2 205 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 NKD2Q969F2 451 aaPredicted RBP17.39■□□□□ 0.37
UBFD1-201ENST00000395878 CPXM1Q96SM3 734 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 NXF3Q9H4D5 531 aaKnown RBP17.39■□□□□ 0.37
UBFD1-201ENST00000395878 URADA6NGE7 173 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 PRR5-ARHGAP8B1AHC4 643 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 ARHGAP8P85298 464 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 FOLH1Q04609 750 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 SERPINA13PQ6UXR4 307 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 C16orf62Q7Z3J2 963 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 IZUMO1Q8IYV9 350 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 PTCD2Q8WV60 388 aaKnown RBP17.38■□□□□ 0.37
UBFD1-201ENST00000395878 OR52E6Q96RD3 313 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 ST6GALNAC4Q9H4F1 302 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 CAB39LQ9H9S4 337 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 CCNB1IP1Q9NPC3 277 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 CNTNAP1P78357 1384 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 PGM3O95394 542 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 ADH1AP07327 375 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 TM4SF1P30408 202 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 SLC7A2P52569 658 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 UGT2B15P54855 530 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 PTP4A2Q12974 167 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 USP4Q13107 963 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 LSM12Q3MHD2 195 aaKnown RBP17.38■□□□□ 0.37
UBFD1-201ENST00000395878 CERCAMQ5T4B2 595 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 SDHAF4Q5VUM1 108 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 MON1BQ7L1V2 547 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.38■□□□□ 0.37
UBFD1-201ENST00000395878 HEXDCQ8WVB3 486 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 WDR60Q8WVS4 1066 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 CXorf40BQ96DE9 158 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 SAMHD1Q9Y3Z3 626 aaKnown RBP17.38■□□□□ 0.37
UBFD1-201ENST00000395878 AP4B1Q9Y6B7 739 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 C4BPAP04003 597 aaKnown RBP17.38■□□□□ 0.37
UBFD1-201ENST00000395878 HIST1H2ABP04908 130 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 C2P06681 752 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 CTPS1P17812 591 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 EVX2Q03828 476 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 NDUFAF6Q330K2 333 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 HIST3H2AQ7L7L0 130 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 SPATA19Q7Z5L4 167 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 AMIGO2Q86SJ2 522 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 RASAL3Q86YV0 1011 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 GPR156Q8NFN8 814 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 PPP1R13LQ8WUF5 828 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 HIST1H2ACQ93077 130 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 GPR20Q99678 358 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 EPB41L1Q9H4G0 881 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 R3HDM2Q9Y2K5 976 aaKnown RBP17.38■□□□□ 0.37
UBFD1-201ENST00000395878 MRPS23Q9Y3D9 190 aaKnown RBP17.38■□□□□ 0.37
UBFD1-201ENST00000395878 ABRQ12979 859 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 ZSWIM7Q19AV6 140 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 FGFBP2Q9BYJ0 223 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 MAF1Q9H063 256 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 FAM124BQ9H5Z6 455 aaPredicted RBP17.38■□□□□ 0.37
UBFD1-201ENST00000395878 HBS1LQ9Y450 684 aaKnown RBP17.38■□□□□ 0.37
UBFD1-201ENST00000395878 PCDHB9Q9Y5E1 797 aa17.38■□□□□ 0.37
UBFD1-201ENST00000395878 SCAMP3O14828 347 aaKnown RBP17.37■□□□□ 0.37
UBFD1-201ENST00000395878 SEC24AO95486 1093 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 CCNE2O96020 404 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 ASGR1P07306 291 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 CDC25CP30307 473 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 GPAT3Q53EU6 434 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 KRT74Q7RTS7 529 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 SPPL2BQ8TCT7 592 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 CLK4Q9HAZ1 481 aaKnown RBP17.37■□□□□ 0.37
UBFD1-201ENST00000395878 NRP2O60462 931 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 PPP1R11O60927 126 aaPredicted RBP17.37■□□□□ 0.37
UBFD1-201ENST00000395878 SERPINB7O75635 380 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 NOL4O94818 638 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 ZNF37AP17032 561 aaPredicted RBP17.37■□□□□ 0.37
UBFD1-201ENST00000395878 AGMOQ6ZNB7 445 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 KBTBD2Q8IY47 623 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 BTN2A3PQ96KV6 586 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 KLHL31Q9H511 634 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 PRDM8Q9NQV8 689 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 ZNHIT2Q9UHR6 403 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 PCDHGC3Q9UN70 934 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 CLDN11O75508 207 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 DUSP28Q4G0W2 176 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 SLC4A11Q8NBS3 891 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 KLHL5Q96PQ7 755 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 ARL8BQ9NVJ2 186 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 RPP40O75818 363 aaKnown RBP17.37■□□□□ 0.37
UBFD1-201ENST00000395878 HTR7P34969 479 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 BRCC3P46736 316 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 MTAPQ13126 283 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 PARP15Q460N3 678 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 FAM46CQ5VWP2 391 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 TAPT1Q6NXT6 567 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 HIPK1Q86Z02 1210 aa17.37■□□□□ 0.37
UBFD1-201ENST00000395878 S100A13Q99584 98 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms