RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 GEN1Q17RS7 908 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 PLEKHG6Q3KR16 790 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 FSTL4Q6MZW2 842 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 KIAA0408Q6ZU52 694 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 TRIM42Q8IWZ5 723 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 LMNTD2Q8IXW0 634 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 PHTF2Q8N3S3 785 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 ZNF75CPQ92670 426 aaPredicted RBP19.37■□□□□ 0.69
LMNB1-202ENST00000395354 ACDQ96AP0 544 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 MSANTD3Q96H12 275 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 UHRF1Q96T88 793 aaPredicted RBP19.37■□□□□ 0.69
LMNB1-202ENST00000395354 C2orf49Q9BVC5 232 aaPredicted RBP19.37■□□□□ 0.69
LMNB1-202ENST00000395354 RHOJQ9H4E5 214 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 NOD2Q9HC29 1040 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 INTS6Q9UL03 887 aaKnown RBP19.37■□□□□ 0.69
LMNB1-202ENST00000395354 CA14Q9ULX7 337 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 COL4A3Q01955 1670 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 TTC24A2A3L6 582 aaPredicted RBP19.36■□□□□ 0.69
LMNB1-202ENST00000395354 TBC1D3BA6NDS4 549 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 SLC7A4O43246 635 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 KAT7O95251 611 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 CD160O95971 181 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 GSTA1P08263 222 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 TYK2P29597 1187 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 GRIA2P42262 883 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 DMC1Q14565 340 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 MLF2Q15773 248 aaPredicted RBP19.36■□□□□ 0.69
LMNB1-202ENST00000395354 PITRM1Q5JRX3 1037 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 CDHR3Q6ZTQ4 885 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 TPRG1Q6ZUI0 275 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 METTL3Q86U44 580 aaKnown RBP19.36■□□□□ 0.69
LMNB1-202ENST00000395354 ADIPOR2Q86V24 386 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 AHI1Q8N157 1196 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 DCLK2Q8N568 766 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 TERB1Q8NA31 727 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 BRSK1Q8TDC3 778 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 SPOCK2Q92563 424 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 GPR22Q99680 433 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 ELAC2Q9BQ52 826 aaKnown RBP19.36■□□□□ 0.69
LMNB1-202ENST00000395354 PITPNM3Q9BZ71 974 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 SLC13A1Q9BZW2 595 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 SLC2A6Q9UGQ3 507 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 STARD13Q9Y3M8 1113 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 ACTL7AQ9Y615 435 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 KLF11O14901 512 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 BIRC5O15392 142 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 TMCC1O94876 653 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 APODP05090 189 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 SERPINB4P48594 390 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 SCNN1BP51168 640 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 ACVR1Q04771 509 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 PDE1CQ14123 709 aaPredicted RBP19.36■□□□□ 0.69
LMNB1-202ENST00000395354 PON2Q15165 354 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 FUT11Q495W5 492 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 RETSATQ6NUM9 610 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 C6orf89Q6UWU4 347 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 NUDT18Q6ZVK8 323 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 YTHDF3Q7Z739 585 aaKnown RBP19.36■□□□□ 0.69
LMNB1-202ENST00000395354 GALNT7Q86SF2 657 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 ZC3HC1Q86WB0 502 aaKnown RBP19.36■□□□□ 0.69
LMNB1-202ENST00000395354 SUGP1Q8IWZ8 645 aaKnown RBP19.36■□□□□ 0.69
LMNB1-202ENST00000395354 RAB3IL1Q8TBN0 382 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 WFIKKN2Q8TEU8 576 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 FAM3CQ92520 227 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 PTPRN2Q92932 1015 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 VPS39Q96JC1 886 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 PLCD4Q9BRC7 762 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 ARHGEF3Q9NR81 526 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 SNX15Q9NRS6 342 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 VPS51Q9UID3 782 aa19.36■□□□□ 0.69
LMNB1-202ENST00000395354 BDP1A6H8Y1 2624 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 TTC28Q96AY4 2481 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 SHISA7A6NL88 538 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 PRRT4C9JH25 899 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 MAN2B1O00754 1011 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 SNAP91O60641 907 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 EDF1O60869 148 aaKnown RBP19.35■□□□□ 0.69
LMNB1-202ENST00000395354 POLR2EP19388 210 aaKnown RBP19.35■□□□□ 0.69
LMNB1-202ENST00000395354 CD72P21854 359 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 RGRP47804 291 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 PRKCQQ04759 706 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 TMEM215Q68D42 235 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 MBLAC2Q68D91 279 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 NEPROQ6NW34 567 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 LCA5Q86VQ0 697 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 C2CD4AQ8NCU7 369 aaPredicted RBP19.35■□□□□ 0.69
LMNB1-202ENST00000395354 TDRD1Q9BXT4 1180 aaKnown RBP19.35■□□□□ 0.69
LMNB1-202ENST00000395354 MANSC1Q9H8J5 431 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 LHX3Q9UBR4 397 aa19.35■□□□□ 0.69
LMNB1-202ENST00000395354 MTO1Q9Y2Z2 717 aaKnown RBP19.35■□□□□ 0.69
LMNB1-202ENST00000395354 CCDC78A2IDD5 438 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 LDB2O43679 373 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 GJB3O75712 270 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 IL1BP01584 269 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 ZXDAP98168 799 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 SLC20A2Q08357 652 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 GRSF1Q12849 480 aaKnown RBP eCLIP19.34■□□□□ 0.69
LMNB1-202ENST00000395354 TMEM196Q5HYL7 178 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 NCEH1Q6PIU2 408 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 ZNF852Q6ZMS4 543 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms