RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 RGRP47804 291 aa15.88■□□□□ 0.13
SNCA-205ENST00000394991 SERINC3Q13530 473 aa15.88■□□□□ 0.13
SNCA-205ENST00000394991 STRADAQ7RTN6 431 aa15.88■□□□□ 0.13
SNCA-205ENST00000394991 DNAAF5Q86Y56 855 aa15.88■□□□□ 0.13
SNCA-205ENST00000394991 CAMK1DQ8IU85 385 aa15.88■□□□□ 0.13
SNCA-205ENST00000394991 CACNA2D3Q8IZS8 1091 aa15.88■□□□□ 0.13
SNCA-205ENST00000394991 MSANTD4Q8NCY6 345 aa15.88■□□□□ 0.13
SNCA-205ENST00000394991 KIAA1524Q8TCG1 905 aa15.88■□□□□ 0.13
SNCA-205ENST00000394991 GPBAR1Q8TDU6 330 aa15.88■□□□□ 0.13
SNCA-205ENST00000394991 CENPIQ92674 756 aaPredicted RBP15.88■□□□□ 0.13
SNCA-205ENST00000394991 ART4Q93070 314 aa15.88■□□□□ 0.13
SNCA-205ENST00000394991 PDFQ9HBH1 243 aa15.88■□□□□ 0.13
SNCA-205ENST00000394991 MOSPD1Q9UJG1 213 aa15.88■□□□□ 0.13
SNCA-205ENST00000394991 NKX2-8O15522 239 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 DUX1O43812 170 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 RAD1O60671 282 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 FGF1P05230 155 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 HOXC4P09017 264 aaPredicted RBP15.87■□□□□ 0.13
SNCA-205ENST00000394991 CCNB1P14635 433 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 KELP23276 732 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 CSF2RBP32927 897 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 TRIM23P36406 574 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 PTPN9P43378 593 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 MTIF2P46199 727 aaKnown RBP15.87■□□□□ 0.13
SNCA-205ENST00000394991 LIMK2P53671 638 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 YBEYP58557 167 aaPredicted RBP15.87■□□□□ 0.13
SNCA-205ENST00000394991 CLPPQ16740 277 aaPredicted RBP15.87■□□□□ 0.13
SNCA-205ENST00000394991 BRAT1Q6PJG6 821 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 LIPIQ6XZB0 460 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 FAM26EQ8N5C1 309 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 EPS8L1Q8TE68 723 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 ZDHHC1Q8WTX9 485 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 FAM172AQ8WUF8 416 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 PATE1Q8WXA2 126 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 NTAN1Q96AB6 310 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 ZNF641Q96N77 438 aaPredicted RBP15.87■□□□□ 0.13
SNCA-205ENST00000394991 SUDS3Q9H7L9 328 aaPredicted RBP15.87■□□□□ 0.13
SNCA-205ENST00000394991 UBA2Q9UBT2 640 aaPredicted RBP15.87■□□□□ 0.13
SNCA-205ENST00000394991 PLAAQ9Y263 795 aa15.87■□□□□ 0.13
SNCA-205ENST00000394991 SPENQ96T58 3664 aaKnown RBP15.87■□□□□ 0.13
SNCA-205ENST00000394991 RP1L1Q8IWN7 2480 aaPredicted RBP15.86■□□□□ 0.13
SNCA-205ENST00000394991 BLACEA4D250 179 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 CFAP69A5D8W1 941 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 RHPN2P1A8MT19 583 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 ZNF891A8MT65 544 aaPredicted RBP15.86■□□□□ 0.13
SNCA-205ENST00000394991 ECEL1O95672 775 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 FUCA1P04066 466 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 EPHB2P29323 1055 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 TRA2AQ13595 282 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNCA-205ENST00000394991 NCAPHQ15003 741 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 MAN2A1Q16706 1144 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 CFAP58Q5T655 872 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 NKAIN2Q5VXU1 208 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 HIST2H2BCQ6DN03 193 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 C9orf43Q8TAL5 461 aaPredicted RBP15.86■□□□□ 0.13
SNCA-205ENST00000394991 SLC20A1Q8WUM9 679 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 PTCD2Q8WV60 388 aaKnown RBP15.86■□□□□ 0.13
SNCA-205ENST00000394991 CATSPER2Q96P56 530 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 DDA1Q9BW61 102 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 NAA15Q9BXJ9 866 aaKnown RBP15.86■□□□□ 0.13
SNCA-205ENST00000394991 WDR26Q9H7D7 661 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 CARS2Q9HA77 564 aaKnown RBP15.86■□□□□ 0.13
SNCA-205ENST00000394991 OCIAD1Q9NX40 245 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 TMEM9Q9P0T7 183 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 TAAR2Q9P1P5 351 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 ST14Q9Y5Y6 855 aa15.86■□□□□ 0.13
SNCA-205ENST00000394991 WASH4PA8MWX3 477 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 J3KR12 359 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 ELFN1P0C7U0 828 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 THRAP10827 490 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 MMP8P22894 467 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 MPSTP25325 297 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 AK4P27144 223 aaPredicted RBP15.85■□□□□ 0.13
SNCA-205ENST00000394991 STAT1P42224 750 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 GRM3Q14832 879 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 TSR1Q2NL82 804 aaKnown RBP15.85■□□□□ 0.13
SNCA-205ENST00000394991 PARP15Q460N3 678 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 MIIPQ5JXC2 388 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 KLHDC7AQ5VTJ3 777 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 UMODL1-AS1Q8N2C9 162 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 AGBL5Q8NDL9 886 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 ECHDC3Q96DC8 303 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 SLC45A3Q96JT2 553 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 TUBGCP5Q96RT8 1024 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 C11orf70Q9BRQ4 267 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 SLC39A1Q9NY26 324 aa15.85■□□□□ 0.13
SNCA-205ENST00000394991 NOCTQ9UK39 431 aaKnown RBP15.85■□□□□ 0.13
SNCA-205ENST00000394991 IGHV1OR21-1A0A087WYE8 117 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 PPM1DO15297 605 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 TEX33O43247 280 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 CYP1A1P04798 512 aaPredicted RBP15.84■□□□□ 0.13
SNCA-205ENST00000394991 CEACAM5P06731 702 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 PRKAR1AP10644 381 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 OAS2P29728 719 aaKnown RBP15.84■□□□□ 0.13
SNCA-205ENST00000394991 GPR3P46089 330 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 CDC20Q12834 499 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 C4orf17Q53FE4 359 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 AFMIDQ63HM1 303 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 ANKS6Q68DC2 871 aa15.84■□□□□ 0.13
SNCA-205ENST00000394991 PNCKQ6P2M8 343 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms