RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 SEPT6Q14141 434 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 SETDB1Q15047 1291 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 CYTH1Q15438 398 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 GSTA3Q16772 222 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 ARHGAP15Q53QZ3 475 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 HSP90AA5PQ58FG0 334 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 SPANXN3Q5MJ09 141 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 ANO7Q6IWH7 933 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 PKN3Q6P5Z2 889 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 RASSF3Q86WH2 238 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 TMEM25Q86YD3 366 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 APCDD1Q8J025 514 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.99□□□□□ -1.29
RTN4-205ENST00000394609 ST13P5Q8NFI4 369 aaPredicted RBP6.99□□□□□ -1.29
RTN4-205ENST00000394609 GDAP1Q8TB36 358 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 ITFG1Q8TB96 612 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 GDPD5Q8WTR4 605 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 ZNF707Q96C28 371 aaPredicted RBP6.99□□□□□ -1.29
RTN4-205ENST00000394609 CERS2Q96G23 380 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 ABHD8Q96I13 439 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 NSMCE3Q96MG7 304 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 PSKH2Q96QS6 385 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 AGAP2Q99490 1192 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 CINPQ9BW66 212 aaPredicted RBP6.99□□□□□ -1.29
RTN4-205ENST00000394609 APOL5Q9BWW9 433 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 LINC00597Q9H2U6 94 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 C12orf65Q9H3J6 166 aaKnown RBP6.99□□□□□ -1.29
RTN4-205ENST00000394609 RETREG1Q9H6L5 497 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 PIDD1Q9HB75 910 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 GPAMQ9HCL2 828 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 SAR1AQ9NR31 198 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 C20orf96Q9NUD7 363 aaPredicted RBP6.99□□□□□ -1.29
RTN4-205ENST00000394609 TDP1Q9NUW8 608 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 PDP2Q9P2J9 529 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 STOML1Q9UBI4 398 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 SLC2A6Q9UGQ3 507 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 SEPT3Q9UH03 358 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 ARHGAP26Q9UNA1 814 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 HRH3Q9Y5N1 445 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 NYNRINQ9P2P1 1898 aaKnown RBP6.99□□□□□ -1.29
RTN4-205ENST00000394609 PRRC2BQ5JSZ5 2229 aaKnown RBP6.99□□□□□ -1.29
RTN4-205ENST00000394609 HMX2A2RU54 273 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 EPOPA6NHQ4 379 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 FAM47DPA6NHR8 397 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 K7ERQ8 282 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 AP3B1O00203 1094 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 PEX11AO75192 247 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SKAP2O75563 359 aaPredicted RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 ZMPSTE24O75844 475 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 KRT37O76014 449 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 TMCC1O94876 653 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 VAPBO95292 243 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 CD160O95971 181 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 PROCP04070 461 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SNRPAP09012 282 aaKnown RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 HNRNPA1P09651 372 aaKnown RBP eCLIP6.98□□□□□ -1.298e-6■□□□□ 8.7
RTN4-205ENST00000394609 PIRTP0C851 137 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 CEBPBP17676 345 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 CA4P22748 312 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 HOXA9P31269 272 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 PEX19P40855 299 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 ABCG1P45844 678 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 MXRA7P84157 204 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SF3A3Q12874 501 aaKnown RBP eCLIP6.98□□□□□ -1.29
RTN4-205ENST00000394609 CUL3Q13618 768 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 GALNT3Q14435 633 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SLC1A5Q15758 541 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 MPPE1Q53F39 396 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 PCID2Q5JVF3 399 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SIRPB2Q5JXA9 342 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 COL13A1Q5TAT6 717 aaPredicted RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 PDE12Q6L8Q7 609 aaKnown RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 ESRP1Q6NXG1 681 aaKnown RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 CYS1Q717R9 158 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 ARID3BQ8IVW6 561 aaPredicted RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 FAM217AQ8IXS0 508 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 DYDC1Q8WWB3 177 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 LZICQ8WZA0 190 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 CDKL2Q92772 493 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 FAM136AQ96C01 138 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 ATXN7L3BQ96GX2 97 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 ZNF599Q96NL3 588 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SAMD11Q96NU1 681 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 PPP1R2P1Q96PQ5 205 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 MGME1Q9BQP7 344 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 KIFC1Q9BW19 673 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 YIPF3Q9GZM5 350 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 IGFLR1Q9H665 355 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 VPS45Q9NRW7 570 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 NKIRAS1Q9NYS0 192 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 VPS51Q9UID3 782 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 LNPEPQ9UIQ6 1025 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 CDH22Q9UJ99 828 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SOX13Q9UN79 622 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 ZNF510Q9Y2H8 683 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 MRPS23Q9Y3D9 190 aaKnown RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 OR51B4Q9Y5P0 310 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 DOCK6Q96HP0 2047 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 LOC285095A0A1B0GVY8 99 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 E2F8A0AVK6 867 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms