RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ZNF555Q8NEP9 628 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 NLGN2Q8NFZ4 835 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 CENPIQ92674 756 aaPredicted RBP16.17■□□□□ 0.18
PCDH1-203ENST00000394536 TMIGD2Q96BF3 282 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 HSPBAP1Q96EW2 488 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 PPM1MQ96MI6 270 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 KATNAL1Q9BW62 490 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 AGO3Q9H9G7 860 aaKnown RBP16.17■□□□□ 0.18
PCDH1-203ENST00000394536 SYTL2Q9HCH5 934 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 TAS2R13Q9NYV9 303 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 ANAPC2Q9UJX6 822 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 PIP5K1BO14986 540 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 ECT2LQ008S8 904 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 MAPRE1Q15691 268 aaKnown RBP16.17■□□□□ 0.18
PCDH1-203ENST00000394536 MILR1Q7Z6M3 343 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 ERLEC1Q96DZ1 483 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 RPL10LQ96L21 214 aaKnown RBP16.17■□□□□ 0.18
PCDH1-203ENST00000394536 KLHL32Q96NJ5 620 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 CACNA2D2Q9NY47 1150 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 COL24A1Q17RW2 1714 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 CBX4O00257 560 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 PIRO00625 290 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 TUBB3Q13509 450 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 IKBKEQ14164 716 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 PTPRNQ16849 979 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 PIGGQ5H8A4 983 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 CFAP52Q8N1V2 620 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 GIPC3Q8TF64 312 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 TWIST2Q8WVJ9 160 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 TMEM40Q8WWA1 233 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 LIMD1Q9UGP4 676 aa16.17■□□□□ 0.18
PCDH1-203ENST00000394536 TBC1D4O60343 1298 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 CCNCP24863 283 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 ADSLP30566 484 aaPredicted RBP16.16■□□□□ 0.18
PCDH1-203ENST00000394536 C21orf59P57076 290 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 RHDQ02161 417 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 SPOUT1Q5T280 376 aaKnown RBP16.16■□□□□ 0.18
PCDH1-203ENST00000394536 KIAA1841Q6NSI8 718 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 UGT2A3Q6UWM9 527 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 NAT16Q8N8M0 369 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 ATP6V0D2Q8N8Y2 350 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 LPCAT1Q8NF37 534 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 TNIP2Q8NFZ5 429 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 SOX17Q9H6I2 414 aaPredicted RBP16.16■□□□□ 0.18
PCDH1-203ENST00000394536 MATN3O15232 486 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 VPS26AO75436 327 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 GLDCP23378 1020 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 DPYSQ14117 519 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 PKDCCQ504Y2 493 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 TIGD5Q53EQ6 642 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 ZNF789Q5FWF6 425 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 TMTC4Q5T4D3 741 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 GLB1LQ6UWU2 654 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 PLEKHG4BQ96PX9 1271 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 KCNA7Q96RP8 456 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 PARK7Q99497 189 aaKnown RBP16.16■□□□□ 0.18
PCDH1-203ENST00000394536 BDH2Q9BUT1 245 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 SENP6Q9GZR1 1112 aaPredicted RBP16.16■□□□□ 0.18
PCDH1-203ENST00000394536 KANSL1LA0AUZ9 987 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 SOCS7O14512 581 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 TFAP2AP05549 437 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 SLC2A4P14672 509 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 HK2P52789 917 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 PPP1R8Q12972 351 aaKnown RBP16.16■□□□□ 0.18
PCDH1-203ENST00000394536 MARVELD2Q8N4S9 558 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 PSMG2Q969U7 264 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 CINPQ9BW66 212 aaPredicted RBP16.16■□□□□ 0.18
PCDH1-203ENST00000394536 GPR63Q9BZJ6 419 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 MUC3BQ9H195 1237 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 AKTIPQ9H8T0 292 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 CNOT6Q9ULM6 557 aaKnown RBP16.16■□□□□ 0.18
PCDH1-203ENST00000394536 OAZ3Q9UMX2 235 aa16.16■□□□□ 0.18
PCDH1-203ENST00000394536 SBF2Q86WG5 1849 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 SMIM35A0A1B0GVV1 85 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 PRORSD1PA6NEY8 169 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 BCL10O95999 233 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 LSM3P62310 102 aaKnown RBP16.15■□□□□ 0.18
PCDH1-203ENST00000394536 NRG1Q02297 640 aaPredicted RBP16.15■□□□□ 0.18
PCDH1-203ENST00000394536 SULT2A1Q06520 285 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 SLC10A7Q0GE19 358 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 GALNT2Q10471 571 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 ITGADQ13349 1161 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 PATL1Q86TB9 770 aaKnown RBP16.15■□□□□ 0.18
PCDH1-203ENST00000394536 CENPLQ8N0S6 344 aaPredicted RBP16.15■□□□□ 0.18
PCDH1-203ENST00000394536 KDM1BQ8NB78 822 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 NTAN1Q96AB6 310 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 CYP2S1Q96SQ9 504 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 SLC29A1Q99808 456 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 ADAM2Q99965 735 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 CXorf21Q9HAI6 301 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 PAIP2BQ9ULR5 123 aaKnown RBP16.15■□□□□ 0.18
PCDH1-203ENST00000394536 RAD54BQ9Y620 910 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 A0A1W2PQH9 124 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 LRRC14BA6NHZ5 514 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 C2orf81A6NN90 581 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 M0R3G1 203 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 CD3EAPO15446 510 aaKnown RBP16.15■□□□□ 0.18
PCDH1-203ENST00000394536 FGF10O15520 208 aaPredicted RBP16.15■□□□□ 0.18
PCDH1-203ENST00000394536 NPHS1O60500 1241 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 WARSP23381 471 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms