RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CDKL3Q8IVW4 592 aaPredicted RBP18.93■□□□□ 0.62
HOXC6-202ENST00000394331 ANKRD52Q8NB46 1076 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 EGLN2Q96KS0 407 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 APBA2Q99767 749 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 SGIP1Q9BQI5 828 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 RNF38Q9H0F5 515 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 PLEKHA5Q9HAU0 1116 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 GPATCH2LQ9NWQ4 482 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 DERAQ9Y315 318 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 MGAMO43451 1857 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 ABCB1P08183 1280 aaPredicted RBP18.93■□□□□ 0.62
HOXC6-202ENST00000394331 IL10P22301 178 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 BST2Q10589 180 aaKnown RBP18.93■□□□□ 0.62
HOXC6-202ENST00000394331 GLRA4Q5JXX5 417 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 LDLRAP1Q5SW96 308 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 LIPMQ5VYY2 423 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 FAAH2Q6GMR7 532 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 SLC22A16Q86VW1 577 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 TNS4Q8IZW8 715 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 HCAR2Q8TDS4 363 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 PCDHGA3Q9Y5H0 932 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.92■□□□□ 0.62
HOXC6-202ENST00000394331 HOXC11O43248 304 aaPredicted RBP18.92■□□□□ 0.62
HOXC6-202ENST00000394331 DDNO94850 711 aaPredicted RBP18.92■□□□□ 0.62
HOXC6-202ENST00000394331 CHRNGP07510 517 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 PGAM1P18669 254 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 TUBA1BP68363 451 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 DCAF4L1Q3SXM0 396 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 RBM48Q5RL73 367 aaKnown RBP18.92■□□□□ 0.62
HOXC6-202ENST00000394331 CRTC3Q6UUV7 619 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 TUBA1AQ71U36 451 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 LSMEM2Q8N112 164 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 ZCCHC7Q8N3Z6 543 aaKnown RBP18.92■□□□□ 0.62
HOXC6-202ENST00000394331 SLC35F5Q8WV83 523 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 PAPPA2Q9BXP8 1791 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 TRPC5OSA6NMA1 111 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 GJC2Q5T442 439 aaPredicted RBP18.92■□□□□ 0.62
HOXC6-202ENST00000394331 TAPT1Q6NXT6 567 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 ACOT1Q86TX2 421 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 ZFP90Q8TF47 636 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 HDAC11Q96DB2 347 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 TRIT1Q9H3H1 467 aaKnown RBP18.92■□□□□ 0.62
HOXC6-202ENST00000394331 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.92■□□□□ 0.62
HOXC6-202ENST00000394331 ZNF358Q9NW07 568 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 MORF4L1Q9UBU8 362 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 EIF3LQ9Y262 564 aaKnown RBP18.92■□□□□ 0.62
HOXC6-202ENST00000394331 PSAT1Q9Y617 370 aa18.92■□□□□ 0.62
HOXC6-202ENST00000394331 MN1Q10571 1320 aaPredicted RBP18.92■□□□□ 0.62
HOXC6-202ENST00000394331 DHRS12A0PJE2 317 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 AURKAO14965 403 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 RFPL2O75678 378 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 CRYZL1O95825 349 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 RALGDSQ12967 914 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 LRRC8EQ6NSJ5 796 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 ZYG11AQ6WRX3 759 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 GK5Q6ZS86 529 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 OFCC1Q8IZS5 231 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 KHSRPQ92945 711 aaKnown RBP eCLIP18.91■□□□□ 0.62
HOXC6-202ENST00000394331 EMID1Q96A84 441 aaPredicted RBP18.91■□□□□ 0.62
HOXC6-202ENST00000394331 SNX18Q96RF0 628 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 EVPLQ92817 2033 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 SYNCRIPO60506 623 aaKnown RBP18.91■□□□□ 0.62
HOXC6-202ENST00000394331 PIGNO95427 931 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 ATP6V1B2P21281 511 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 NR4A2P43354 598 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 SERPINB10P48595 397 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 MAPK10P53779 464 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 SQLEQ14534 574 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 NXNQ6DKJ4 435 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 RFPL4BQ6ZWI9 263 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 SCUBE3Q8IX30 993 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 SCML4Q8N228 414 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 PLD6Q8N2A8 252 aaKnown RBP18.91■□□□□ 0.62
HOXC6-202ENST00000394331 Q8N9G6 341 aaPredicted RBP18.91■□□□□ 0.62
HOXC6-202ENST00000394331 AGR3Q8TD06 166 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 MRPL45Q9BRJ2 306 aaKnown RBP18.91■□□□□ 0.62
HOXC6-202ENST00000394331 FUNDC2Q9BWH2 189 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 NMRAL1Q9HBL8 299 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 TXNDC16Q9P2K2 825 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 ZNF639Q9UID6 485 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 OTOFQ9HC10 1997 aa18.91■□□□□ 0.62
HOXC6-202ENST00000394331 WDR27A2RRH5 827 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 SRP72O76094 671 aaKnown RBP18.9■□□□□ 0.62
HOXC6-202ENST00000394331 UBL4AP11441 157 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 BMP1P13497 986 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 PRKCAP17252 672 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 RPS9P46781 194 aaKnown RBP18.9■□□□□ 0.62
HOXC6-202ENST00000394331 SKIV2LQ15477 1246 aaKnown RBP18.9■□□□□ 0.62
HOXC6-202ENST00000394331 CA9Q16790 459 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 ARL13AQ5H913 290 aaPredicted RBP18.9■□□□□ 0.62
HOXC6-202ENST00000394331 UNC93AQ86WB7 457 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 ATL1Q8WXF7 558 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 C16orf70Q9BSU1 422 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 TBC1D13Q9NVG8 400 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 SLC17A6Q9P2U8 582 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 ITM2BQ9Y287 266 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 UGT2A1Q9Y4X1 527 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 PSMA4P25789 261 aaKnown RBP18.9■□□□□ 0.62
HOXC6-202ENST00000394331 EPHX2P34913 555 aa18.9■□□□□ 0.62
HOXC6-202ENST00000394331 ETFBP38117 255 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms