RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 GJB3O75712 270 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 HAPLN1P10915 354 aaPredicted RBP13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 UGT1A6P19224 532 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 ATP6V1B2P21281 511 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 SOX11P35716 441 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 STX1BP61266 288 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 ACAP2Q15057 778 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 FBXO48Q5FWF7 155 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 RETREG3Q86VR2 466 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 DHFR2Q86XF0 187 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 CILP2Q8IUL8 1156 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 FUNDC1Q8IVP5 155 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 PTERQ96BW5 349 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 TSPAN17Q96FV3 270 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 HMCESQ96FZ2 354 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 ZNF597Q96LX8 424 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 PTPN18Q99952 460 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 SLC25A51Q9H1U9 297 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 LIN28AQ9H9Z2 209 aaKnown RBP13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 MRPL40Q9NQ50 206 aaKnown RBP13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 ATXN10Q9UBB4 475 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 EGFL7Q9UHF1 273 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 FAM149AA5PLN7 773 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 MYADML2A6NDP7 307 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 HNRNPRO43390 633 aaKnown RBP13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 IMPDH1P20839 514 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 SLC5A2P31639 672 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 CDH15P55291 814 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 SH3BGRP55822 239 aaPredicted RBP13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 EIF4EBP2Q13542 120 aaPredicted RBP13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 UNC50Q53HI1 259 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 SAMD4BQ5PRF9 694 aaKnown RBP13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 ARTNQ5T4W7 220 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 CCDC117Q8IWD4 279 aaPredicted RBP13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 DDI1Q8WTU0 396 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 PBXIP1Q96AQ6 731 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 C19orf60Q96EN9 201 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 DTNBP1Q96EV8 351 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 UBXN10Q96LJ8 280 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 AKTIPQ9H8T0 292 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 CD300AQ9UGN4 299 aa13.98□□□□□ -0.17
GAPVD1-205ENST00000394084 TCRBV3S1A0A5B6 114 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 CNTN5O94779 1100 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 SLC7A1P30825 629 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 HOXC13P31276 330 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 CAPRIN1Q14444 709 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 FAM110CQ1W6H9 321 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 ZNF678Q5SXM1 525 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 PIK3R6Q5UE93 754 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 OVOS1Q6IE37 1185 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 ZBTB49Q6ZSB9 765 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 LARP4Q71RC2 724 aaKnown RBP eCLIP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 ISCA2Q86U28 154 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 SLC22A9Q8IVM8 553 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 KCNA7Q96RP8 456 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 RANBP9Q96S59 729 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 SMOC2Q9H3U7 446 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 RGS18Q9NS28 235 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 TMEM181Q9P2C4 612 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 SARDHQ9UL12 918 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 STAMBPO95630 424 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 PIRTP0C851 137 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 CHRM3P20309 590 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 RANBP1P43487 201 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 PSMD8P48556 350 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 FOXA1P55317 472 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 USP46P62068 366 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 YBX1P67809 324 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 FSCN1Q16658 493 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 VPS26BQ4G0F5 336 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 ANKRD23Q86SG2 305 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 SPATA2LQ8IUW3 424 aaPredicted RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 DDIASQ8IXT1 998 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 PTGR2Q8N8N7 351 aaPredicted RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 ZC3H15Q8WU90 426 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 TBATAQ96M53 351 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 OSBPL11Q9BXB4 747 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 AGO3Q9H9G7 860 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 OSER1Q9NX31 292 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 CNOT11Q9UKZ1 510 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 A0A0J9YYE9 177 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 ARHGAP10A1A4S6 786 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 SOCS2O14508 198 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 S1PR4O95977 384 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 SH3BP2P78314 561 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 PLOD1Q02809 727 aaPredicted RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 MARC1Q5VT66 337 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 PSMG2Q969U7 264 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 IMP4Q96G21 291 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 NSUN5Q96P11 429 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 PARK7Q99497 189 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 SP110Q9HB58 689 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 MID1IP1Q9NPA3 183 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 UXTQ9UBK9 157 aaPredicted RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 HEMK1Q9Y5R4 338 aaPredicted RBP13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 TRPV2Q9Y5S1 764 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 CEPT1Q9Y6K0 416 aa13.97□□□□□ -0.17
GAPVD1-205ENST00000394084 HTRA2O43464 458 aaPredicted RBP13.96□□□□□ -0.17
GAPVD1-205ENST00000394084 PEX11BO96011 259 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms