RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 WDR59Q6PJI9 974 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 LIPIQ6XZB0 460 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 TRIM72Q6ZMU5 477 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 DPPA4Q7L190 304 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 C17orf82Q86X59 251 aaPredicted RBP15.43■□□□□ 0.06
CHMP3-202ENST00000393773 ZSCAN1Q8NBB4 408 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 PCDHB18PQ96TA0 734 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 LGR4Q9BXB1 951 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 CATSPERBQ9H7T0 1116 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 RDH14Q9HBH5 336 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 USP9YO00507 2555 aaPredicted RBP15.42■□□□□ 0.06
CHMP3-202ENST00000393773 USP9XQ93008 2570 aaPredicted RBP15.42■□□□□ 0.06
CHMP3-202ENST00000393773 PRSS38A1L453 326 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 PES1O00541 588 aaKnown RBP15.42■□□□□ 0.06
CHMP3-202ENST00000393773 CPNE6O95741 557 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 ELFN1P0C7U0 828 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 CCL4P13236 92 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 KELP23276 732 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 ERCC5P28715 1186 aaPredicted RBP15.42■□□□□ 0.06
CHMP3-202ENST00000393773 SOX5P35711 763 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 NSFP46459 744 aaKnown RBP15.42■□□□□ 0.06
CHMP3-202ENST00000393773 CSNK1DP48730 415 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 MAZP56270 477 aaKnown RBP15.42■□□□□ 0.06
CHMP3-202ENST00000393773 TLE1Q04724 770 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 ARHGEF7Q14155 803 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 MON1BQ7L1V2 547 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 NRROSQ86YC3 692 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 PHF13Q86YI8 300 aaPredicted RBP15.42■□□□□ 0.06
CHMP3-202ENST00000393773 TSEN2Q8NCE0 465 aaKnown RBP15.42■□□□□ 0.06
CHMP3-202ENST00000393773 KIAA1524Q8TCG1 905 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 NUDT22Q9BRQ3 303 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 SELENOOQ9BVL4 669 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 SLC12A9Q9BXP2 914 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 SLC25A18Q9H1K4 315 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 DPEP2Q9H4A9 486 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 WDR26Q9H7D7 661 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 ATP13A3Q9H7F0 1226 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 CYP4F12Q9HCS2 524 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 SAMSN1Q9NSI8 373 aaKnown RBP15.42■□□□□ 0.06
CHMP3-202ENST00000393773 GEMIN8Q9NWZ8 242 aaKnown RBP15.42■□□□□ 0.06
CHMP3-202ENST00000393773 ADAM22Q9P0K1 906 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 PCDHB11Q9Y5F2 797 aa15.42■□□□□ 0.06
CHMP3-202ENST00000393773 STMND1H3BQB6 276 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 HGSO14964 777 aaPredicted RBP15.41■□□□□ 0.06
CHMP3-202ENST00000393773 B4GAT1O43505 415 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 SERPINA4P29622 427 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 ZNF143P52747 638 aaPredicted RBP15.41■□□□□ 0.06
CHMP3-202ENST00000393773 AIF1P55008 147 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 UBE2HP62256 183 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 CLEC16AQ2KHT3 1053 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 TCP11X2Q5H9J9 407 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 PPP1R15BQ5SWA1 713 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 AFMIDQ63HM1 303 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 ZNF574Q6ZN55 896 aaPredicted RBP15.41■□□□□ 0.06
CHMP3-202ENST00000393773 SRLQ86TD4 932 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 RCBTB1Q8NDN9 531 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 GPBAR1Q8TDU6 330 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 CELF6Q96J87 481 aaKnown RBP15.41■□□□□ 0.06
CHMP3-202ENST00000393773 NSMCE3Q96MG7 304 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 SPATS2LQ9NUQ6 558 aaKnown RBP15.41■□□□□ 0.06
CHMP3-202ENST00000393773 TAB2Q9NYJ8 693 aa15.41■□□□□ 0.06
CHMP3-202ENST00000393773 IGHV5-10-1A0A0J9YXX1 117 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 SIGLEC16A6NMB1 481 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 TRAFD1O14545 582 aaPredicted RBP15.4■□□□□ 0.06
CHMP3-202ENST00000393773 CALB1P05937 261 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 MYCLP1P12525 358 aaPredicted RBP15.4■□□□□ 0.06
CHMP3-202ENST00000393773 CCNB1P14635 433 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 EEF1GP26641 437 aaKnown RBP15.4■□□□□ 0.06
CHMP3-202ENST00000393773 CSF2RBP32927 897 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 STAT1P42224 750 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 NDST2P52849 883 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 OR1D5P58170 312 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 TPI1P60174 286 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 POLR2FP61218 127 aaKnown RBP15.4■□□□□ 0.06
CHMP3-202ENST00000393773 RPL7AP62424 266 aaKnown RBP15.4■□□□□ 0.06
CHMP3-202ENST00000393773 CLPPQ16740 277 aaPredicted RBP15.4■□□□□ 0.06
CHMP3-202ENST00000393773 TSR1Q2NL82 804 aaKnown RBP15.4■□□□□ 0.06
CHMP3-202ENST00000393773 AMZ1Q400G9 498 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 PNCKQ6P2M8 343 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 SCYL2Q6P3W7 929 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 PIM3Q86V86 326 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 JPH3Q8WXH2 748 aaPredicted RBP15.4■□□□□ 0.06
CHMP3-202ENST00000393773 NKD1Q969G9 470 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 CCDC74BQ96LY2 380 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 COQ10AQ96MF6 247 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 MCEEQ96PE7 176 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 ADNPQ9H2P0 1102 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 PCDHGA3Q9Y5H0 932 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 ST14Q9Y5Y6 855 aa15.4■□□□□ 0.06
CHMP3-202ENST00000393773 FGF1P05230 155 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 FGF3P11487 239 aaPredicted RBP15.39■□□□□ 0.05
CHMP3-202ENST00000393773 HTR7P34969 479 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 PAPOLAP51003 745 aaKnown RBP15.39■□□□□ 0.05
CHMP3-202ENST00000393773 TMEM164Q5U3C3 297 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 DNAJC24Q6P3W2 148 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 ARHGAP12Q8IWW6 846 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 NPWQ8N729 165 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 ZNF564Q8TBZ8 553 aaPredicted RBP15.39■□□□□ 0.05
CHMP3-202ENST00000393773 ZDHHC1Q8WTX9 485 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 PTCD2Q8WV60 388 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms