RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 LRRC72A6NJI9 287 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 LDB2O43679 373 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 AGTP01019 485 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 GSTA2P09210 222 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 PTSQ03393 145 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 ANKRD22Q5VYY1 191 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 IZUMO3Q5VZ72 239 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 WDR93Q6P2C0 686 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 IQCHQ86VS3 1027 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 HORMAD1Q86X24 394 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 NAT9Q9BTE0 207 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 BTBD1Q9H0C5 482 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 TREX1Q9NSU2 369 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 NLE1Q9NVX2 485 aaPredicted RBP13.3□□□□□ -0.28
USP44-202ENST00000393091 SMOXQ9NWM0 555 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 ZFR2Q9UPR6 939 aaKnown RBP13.3□□□□□ -0.28
USP44-202ENST00000393091 A0A1W2PP55 124 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 TCRBV7S3A2A0A539 114 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 NPIPB15A6NHN6 443 aaPredicted RBP13.29□□□□□ -0.28
USP44-202ENST00000393091 METTL12A8MUP2 240 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 IFNB1P01574 187 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 IGHV4-34P06331 123 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 TUBBP07437 444 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 ADRA1DP25100 572 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 CNGA3Q16281 694 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 FBXL19Q6PCT2 694 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 OR6K2Q8NGY2 324 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 HMGB4Q8WW32 186 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 CENPTQ96BT3 561 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 SERPINB12Q96P63 405 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 OMDQ99983 421 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 TRIM51Q9BSJ1 452 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 FSD1LQ9BXM9 530 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 KPNA3O00505 521 aaPredicted RBP13.29□□□□□ -0.28
USP44-202ENST00000393091 STK25O00506 426 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 LHCGRP22888 699 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 ADCY8P40145 1251 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 DMWDQ09019 674 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 ILF2Q12905 390 aaKnown RBP13.29□□□□□ -0.28
USP44-202ENST00000393091 PMS2CLQ68D20 193 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 GALNT7Q86SF2 657 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 PRUNE1Q86TP1 453 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 FOXJ1Q92949 421 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 SIGLEC10Q96LC7 697 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 VPS35Q96QK1 796 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 IL17CQ9P0M4 197 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 B4GALT6Q9UBX8 382 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 SOX13Q9UN79 622 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 F5P12259 2224 aa13.29□□□□□ -0.28
USP44-202ENST00000393091 FAM237BA0A1B0GVD1 139 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 SEMA4FO95754 770 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 C1SP09871 688 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 DNAJC21Q5F1R6 531 aaKnown RBP13.28□□□□□ -0.28
USP44-202ENST00000393091 PCID2Q5JVF3 399 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 ESRP1Q6NXG1 681 aaKnown RBP13.28□□□□□ -0.28
USP44-202ENST00000393091 TMEM135Q86UB9 458 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 RYBPQ8N488 228 aaPredicted RBP13.28□□□□□ -0.28
USP44-202ENST00000393091 TP53I13Q8NBR0 393 aaPredicted RBP13.28□□□□□ -0.28
USP44-202ENST00000393091 STYXQ8WUJ0 223 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 EID2BQ96D98 161 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 SLC6A17Q9H1V8 727 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 POLR3BQ9NW08 1133 aaPredicted RBP13.28□□□□□ -0.28
USP44-202ENST00000393091 PMPCBO75439 489 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 CRTAMO95727 393 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 CSTF1Q05048 431 aaKnown RBP13.28□□□□□ -0.28
USP44-202ENST00000393091 IPMKQ8NFU5 416 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 DTD2Q96FN9 168 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 TCAF1Q9Y4C2 921 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 SPO11Q9Y5K1 396 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 TRBV5-4A0A0C4DH59 114 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 HEATR9A2RTY3 570 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 PROB1E7EW31 1015 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 ITGA8P53708 1063 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 HENMT1Q5T8I9 393 aaKnown RBP13.28□□□□□ -0.28
USP44-202ENST00000393091 CCDC70Q6NSX1 233 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.28□□□□□ -0.28
USP44-202ENST00000393091 TMEM145Q8NBT3 493 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 LPCAT1Q8NF37 534 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 TBATAQ96M53 351 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 KLF6Q99612 283 aaPredicted RBP13.28□□□□□ -0.28
USP44-202ENST00000393091 TXLNGYQ9BZA5 131 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 ASIC3Q9UHC3 531 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 TEX264Q9Y6I9 313 aa13.28□□□□□ -0.28
USP44-202ENST00000393091 RNASEH2AO75792 299 aaKnown RBP13.27□□□□□ -0.28
USP44-202ENST00000393091 APRTP07741 180 aa13.27□□□□□ -0.28
USP44-202ENST00000393091 ANO7Q6IWH7 933 aa13.27□□□□□ -0.28
USP44-202ENST00000393091 ADAMTSL4Q6UY14 1074 aa13.27□□□□□ -0.28
USP44-202ENST00000393091 CNPY4Q8N129 248 aa13.27□□□□□ -0.28
USP44-202ENST00000393091 AGGF1Q8N302 714 aaeCLIP13.27□□□□□ -0.28
USP44-202ENST00000393091 GPR150Q8NGU9 434 aa13.27□□□□□ -0.28
USP44-202ENST00000393091 ATG2BQ96BY7 2078 aa13.27□□□□□ -0.29
USP44-202ENST00000393091 TRIM23P36406 574 aa13.27□□□□□ -0.29
USP44-202ENST00000393091 NBL1P41271 181 aa13.27□□□□□ -0.29
USP44-202ENST00000393091 SPINT3P49223 89 aa13.27□□□□□ -0.29
USP44-202ENST00000393091 FNTBP49356 437 aa13.27□□□□□ -0.29
USP44-202ENST00000393091 BASP1P80723 227 aaKnown RBP13.27□□□□□ -0.29
USP44-202ENST00000393091 KIAA1324Q6UXG2 1013 aaKnown RBP13.27□□□□□ -0.29
USP44-202ENST00000393091 TTC7BQ86TV6 843 aa13.27□□□□□ -0.29
USP44-202ENST00000393091 TOE1Q96GM8 510 aaKnown RBP13.27□□□□□ -0.29
USP44-202ENST00000393091 SCARF2Q96GP6 870 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms