RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 SCAMP5Q8TAC9 235 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 DNAJB3Q8WWF6 145 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 CMTM6Q9NX76 183 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 NSMCE4AQ9NXX6 385 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.06■□□□□ 0.48
ERCC2-201ENST00000391941 MARCH4Q9P2E8 410 aaPredicted RBP18.06■□□□□ 0.48
ERCC2-201ENST00000391941 WDR90Q96KV7 1748 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 DHRS12A0PJE2 317 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 NCAM2O15394 837 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 NPHS1O60500 1241 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 PCNAP12004 261 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 PSMD8P48556 350 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 ARSDP51689 593 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 ITKQ08881 620 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 PATL1Q86TB9 770 aaKnown RBP18.06■□□□□ 0.48
ERCC2-201ENST00000391941 BBS5Q8N3I7 341 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 SMYD1Q8NB12 490 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 STON2Q8WXE9 905 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 TANKQ92844 425 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 TCF12Q99081 682 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 GSTO2Q9H4Y5 243 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 TSR3Q9UJK0 312 aaKnown RBP18.06■□□□□ 0.48
ERCC2-201ENST00000391941 TIMM22Q9Y584 194 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 CSADQ9Y600 493 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 PLXNA1Q9UIW2 1896 aa18.06■□□□□ 0.48
ERCC2-201ENST00000391941 H0YJX3 145 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 MERTKQ12866 999 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 ALKAL1Q6UXT8 129 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 ERMP1Q7Z2K6 904 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 SLC15A3Q8IY34 581 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 PTERQ96BW5 349 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 TNIP3Q96KP6 325 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 HBEGFQ99075 208 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 HNRNPABQ99729 332 aaKnown RBP18.05■□□□□ 0.48
ERCC2-201ENST00000391941 RPF2Q9H7B2 306 aaKnown RBP18.05■□□□□ 0.48
ERCC2-201ENST00000391941 MEAF6Q9HAF1 191 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 PFDN4Q9NQP4 134 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 RBM22Q9NW64 420 aaKnown RBP eCLIP18.05■□□□□ 0.48
ERCC2-201ENST00000391941 UBQLN1Q9UMX0 589 aaKnown RBP18.05■□□□□ 0.48
ERCC2-201ENST00000391941 SLC25A27O95847 323 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 FAM163BP0C2L3 166 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 UGT1A1P22309 533 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 UGT1A4P22310 534 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 UGT1A3P35503 534 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 UGT1A5P35504 534 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 RXRGP48443 463 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 TRAF2Q12933 501 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 IHHQ14623 411 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 CYP51A1Q16850 503 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 AAK1Q2M2I8 961 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 SAMD4BQ5PRF9 694 aaKnown RBP18.05■□□□□ 0.48
ERCC2-201ENST00000391941 ANKRD34AQ69YU3 496 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 PPP4R4Q6NUP7 873 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 KCTD8Q6ZWB6 473 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 ZC3H7AQ8IWR0 971 aaKnown RBP18.05■□□□□ 0.48
ERCC2-201ENST00000391941 PARP8Q8N3A8 854 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 HDAC10Q969S8 669 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 C19orf60Q96EN9 201 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 MTG1Q9BT17 334 aaPredicted RBP18.05■□□□□ 0.48
ERCC2-201ENST00000391941 SLC39A8Q9C0K1 460 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 ADAMTS10Q9H324 1103 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 IPO11Q9UI26 975 aaKnown RBP18.05■□□□□ 0.48
ERCC2-201ENST00000391941 SLC8A2Q9UPR5 921 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 DNAJC15Q9Y5T4 150 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 PIP5K1BO14986 540 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 BAIAP3O94812 1187 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 ZBTB11O95625 1053 aaPredicted RBP18.05■□□□□ 0.48
ERCC2-201ENST00000391941 TFAP2DQ7Z6R9 452 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 PPHLN1Q8NEY8 458 aaKnown RBP18.05■□□□□ 0.48
ERCC2-201ENST00000391941 UPF3AQ9H1J1 476 aaKnown RBP18.05■□□□□ 0.48
ERCC2-201ENST00000391941 INIPQ9NRY2 104 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 GPRC5DQ9NZD1 345 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 TCAF1Q9Y4C2 921 aa18.05■□□□□ 0.48
ERCC2-201ENST00000391941 NCF1BA6NI72 391 aaPredicted RBP18.04■□□□□ 0.48
ERCC2-201ENST00000391941 NCF1CA8MVU1 366 aaPredicted RBP18.04■□□□□ 0.48
ERCC2-201ENST00000391941 CLOCKO15516 846 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 MTSS1O43312 755 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 NCF1P14598 390 aaPredicted RBP18.04■□□□□ 0.48
ERCC2-201ENST00000391941 EEF1B2P24534 225 aaKnown RBP18.04■□□□□ 0.48
ERCC2-201ENST00000391941 ESRRGP62508 458 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 UGP2Q16851 508 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 PRAMEF19Q5SWL8 479 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 NANOGP8Q6NSW7 305 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 LARP4Q71RC2 724 aaKnown RBP eCLIP18.04■□□□□ 0.48
ERCC2-201ENST00000391941 BTLAQ7Z6A9 289 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 ATPAF2Q8N5M1 289 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 BPIFB6Q8NFQ5 453 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 GDAP2Q9NXN4 497 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 SELENONQ9NZV5 590 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 ZFC3H1O60293 1989 aaKnown RBP18.04■□□□□ 0.48
ERCC2-201ENST00000391941 SH3PXD2BA1X283 911 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 UBXN8O00124 270 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 MAN1A2O60476 641 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 MATN1P21941 496 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 GPX3P22352 226 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 MLLT10P55197 1068 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 TMEM214Q6NUQ4 689 aaKnown RBP18.04■□□□□ 0.48
ERCC2-201ENST00000391941 LZICQ8WZA0 190 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 LPPQ93052 612 aa18.04■□□□□ 0.48
ERCC2-201ENST00000391941 TOP1MTQ969P6 601 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms