RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CUZD1Q86UP6 607 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 PADI4Q9UM07 663 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 SSR3Q9UNL2 185 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 DNAJA2O60884 412 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 RAMP2O60895 175 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 ECM1Q16610 540 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 FNBP1LQ5T0N5 605 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 EIF3MQ7L2H7 374 aaKnown RBP19.75■□□□□ 0.75
SHANK1-203ENST00000391813 NODALQ96S42 347 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 PORCNQ9H237 461 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 ZNF544Q6NX49 715 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 TXNDC11Q6PKC3 985 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 GCNT7Q6ZNI0 430 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 CASZ1Q86V15 1759 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 CPB2Q96IY4 423 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 C12orf65Q9H3J6 166 aaKnown RBP19.75■□□□□ 0.75
SHANK1-203ENST00000391813 DYRK1BQ9Y463 629 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 SLC22A3O75751 556 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 LRIG2O94898 1065 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 TAL1P17542 331 aaPredicted RBP19.74■□□□□ 0.75
SHANK1-203ENST00000391813 CAPGP40121 348 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 SRP54P61011 504 aaKnown RBP19.74■□□□□ 0.75
SHANK1-203ENST00000391813 ECT2LQ008S8 904 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 PIK3C3Q8NEB9 887 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 ROPN1LQ96C74 230 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 ATXN3LQ9H3M9 355 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 AHSPQ9NZD4 102 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 CRYL1Q9Y2S2 319 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 TDRKHQ9Y2W6 561 aaKnown RBP19.74■□□□□ 0.75
SHANK1-203ENST00000391813 ACLYP53396 1101 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 LGALS3BPQ08380 585 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 LHX5Q9H2C1 402 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 PCDH12Q9NPG4 1184 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 PENKP01210 267 aaPredicted RBP19.74■□□□□ 0.75
SHANK1-203ENST00000391813 GSTM5P46439 218 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 IDH3AP50213 366 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 ATP6V0D1P61421 351 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 STX4Q12846 297 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 PLD1Q13393 1074 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 KCTD8Q6ZWB6 473 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 LRRC49Q8IUZ0 686 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 RBM12BQ8IXT5 1001 aaKnown RBP19.74■□□□□ 0.75
SHANK1-203ENST00000391813 OR2T12Q8NG77 320 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 CITED4Q96RK1 184 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 PEX16Q9Y5Y5 336 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 ASS1P00966 412 aaKnown RBP19.74■□□□□ 0.75
SHANK1-203ENST00000391813 NFKB1P19838 968 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 ACSM2AQ08AH3 577 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 DUSP28Q4G0W2 176 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 TREML2Q5T2D2 321 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 ACSM2BQ68CK6 577 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 FAM183BPQ6ZVS7 135 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 SPATA19Q7Z5L4 167 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 CPSF7Q8N684 471 aaKnown RBP19.74■□□□□ 0.75
SHANK1-203ENST00000391813 PACRGLQ8N7B6 248 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 COQ10BQ9H8M1 238 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 ATP6V1HQ9UI12 483 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 DGKBQ9Y6T7 804 aa19.74■□□□□ 0.75
SHANK1-203ENST00000391813 TMEM150BA6NC51 233 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 KLF11O14901 512 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 CLTBP09497 229 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 SEPHS1P49903 392 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 RALGDSQ12967 914 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 PRKD1Q15139 912 aaPredicted RBP19.73■□□□□ 0.75
SHANK1-203ENST00000391813 SPPL2CQ8IUH8 684 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 LRTOMTQ8WZ04 291 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 FBXO32Q969P5 355 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 EMILIN2Q9BXX0 1053 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 CATSPERZQ9NTU4 200 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 PDLIM1O00151 329 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 FEN1P39748 380 aaKnown RBP19.73■□□□□ 0.75
SHANK1-203ENST00000391813 STXBP5Q5T5C0 1151 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 MIB1Q86YT6 1006 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 TFECO14948 347 aaPredicted RBP19.73■□□□□ 0.75
SHANK1-203ENST00000391813 FGF10O15520 208 aaPredicted RBP19.73■□□□□ 0.75
SHANK1-203ENST00000391813 DHFRP00374 187 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 CYP2A7P20853 494 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 TUBP50607 506 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 CDK18Q07002 472 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 ARL13AQ5H913 290 aaPredicted RBP19.73■□□□□ 0.75
SHANK1-203ENST00000391813 MON1BQ7L1V2 547 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 DDX53Q86TM3 631 aaKnown RBP19.73■□□□□ 0.75
SHANK1-203ENST00000391813 SYT12Q8IV01 421 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 VPS35Q96QK1 796 aa19.73■□□□□ 0.75
SHANK1-203ENST00000391813 CDK5RAP1Q96SZ6 601 aaKnown RBP19.73■□□□□ 0.75
SHANK1-203ENST00000391813 TULP3O75386 442 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 PGK1P00558 417 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 LINGO3P0C6S8 592 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 KPNA1P52294 538 aaPredicted RBP19.72■□□□□ 0.75
SHANK1-203ENST00000391813 GPRIN3Q6ZVF9 776 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 CDK20Q8IZL9 346 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 FGFBP2Q9BYJ0 223 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 IFT80Q9P2H3 777 aaPredicted RBP19.72■□□□□ 0.75
SHANK1-203ENST00000391813 ZMYM5Q9UJ78 669 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 CORO2BQ9UQ03 480 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 LACTBL1A8MY62 500 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 GPR15P49685 360 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 ZNF829Q3KNS6 432 aaPredicted RBP19.72■□□□□ 0.75
SHANK1-203ENST00000391813 GLYATQ6IB77 296 aa19.72■□□□□ 0.75
SHANK1-203ENST00000391813 OVOS1Q6IE37 1185 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 424.4 ms