RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 SMARCE1Q969G3 411 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 ADGRG7Q96K78 797 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 SLITRK1Q96PX8 696 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 PIP5K1AQ99755 562 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 KXD1Q9BQD3 176 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 USP44Q9H0E7 712 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 TKTL2Q9H0I9 626 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 RANBP17Q9H2T7 1088 aaKnown RBP3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 C17orf75Q9HAS0 396 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 NOX4Q9NPH5 578 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 CNGB3Q9NQW8 809 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 SLC6A13Q9NSD5 602 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 FBXO9Q9UK97 447 aaPredicted RBP3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 INTS6Q9UL03 887 aaKnown RBP3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 MKLN1Q9UL63 735 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 ERVK-11Q9UQG0 969 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 SNX9Q9Y5X1 595 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 NFS1Q9Y697 457 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 STON1Q9Y6Q2 735 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 CAPN7Q9Y6W3 813 aa3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 ATXN2Q99700 1313 aaKnown RBP3.12□□□□□ -1.91
RNU6-550P-201ENST00000391057 PLSCR5A0PG75 271 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 CPED1A4D0V7 1026 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 NPIPB15A6NHN6 443 aaPredicted RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 BTBD18B2RXH4 712 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 EPB41L2O43491 1005 aaKnown RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 NDUFS7O75251 213 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 RTN3O95197 1032 aaPredicted RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 ZBTB11O95625 1053 aaPredicted RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 CYC1P08574 325 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 SPARCP09486 303 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 G6PDP11413 515 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 UBL4AP11441 157 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 DDX5P17844 614 aaKnown RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 EIF2S3P41091 472 aaKnown RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 RAD23BP54727 409 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 RPL7AP62424 266 aaKnown RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 SNTA1Q13424 505 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 FGFBP1Q14512 234 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 EFNB3Q15768 340 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 TSTQ16762 297 aaKnown RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 KIF19Q2TAC6 998 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 COL28A1Q2UY09 1125 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 SLC45A4Q5BKX6 768 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 C9orf57Q5W0N0 161 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 ANKRD54Q6NXT1 300 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 RHBDF2Q6PJF5 856 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 B3GNT6Q6ZMB0 384 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 C16orf82Q7Z2V1 217 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 DIS3L2Q8IYB7 885 aaKnown RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 ZNF114Q8NC26 417 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 ETNPPLQ8TBG4 499 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 CREB3L4Q8TEY5 395 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 FAM149B1Q96BN6 582 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 CTAGE1Q96RT6 745 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 CSF3RQ99062 836 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 NAP1L4Q99733 375 aaKnown RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 FAM110AQ9BQ89 295 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 TMEM47Q9BQJ4 181 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 HAUS8Q9BT25 410 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 IFIH1Q9BYX4 1025 aaKnown RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 IL25Q9H293 177 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 NDST4Q9H3R1 872 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 ESRP2Q9H6T0 727 aaKnown RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 KIF9Q9HAQ2 790 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 MKKSQ9NPJ1 570 aaPredicted RBP3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 GPR108Q9NPR9 543 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 ASAH2Q9NR71 780 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 MALT1Q9UDY8 824 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 HAO1Q9UJM8 370 aa3.11□□□□□ -1.91
RNU6-550P-201ENST00000391057 KRTAP29-1A8MX34 341 aaPredicted RBP3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 SOCS6O14544 535 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 PLRG1O43660 514 aaKnown RBP3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 TMEM63AO94886 807 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 MBD4O95243 580 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 PPP1R3DO95685 299 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 TBX18O95935 607 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 MAOAP21397 527 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 PAX3P23760 479 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 BSGP35613 385 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 COMPP49747 757 aaPredicted RBP3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 METAP2P50579 478 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 RRP1P56182 461 aaKnown RBP3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 OLR1P78380 273 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 MPP1Q00013 466 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 GOLGA8DPQ0D2H9 430 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 GRSF1Q12849 480 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 DLG1Q12959 904 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 DCTN2Q13561 401 aaKnown RBP3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 DRAP1Q14919 205 aaPredicted RBP3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 SF3B4Q15427 424 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 CCNG2Q16589 344 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 CTF1Q16619 201 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 C2orf68Q2NKX9 166 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 ALG11Q2TAA5 492 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 EIF2S3LQ2VIR3 472 aaKnown RBP3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 USP41Q3LFD5 358 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 DPCR1Q3MIW9 517 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 PAPPA-AS1Q5QFB9 102 aa3.1□□□□□ -1.91
RNU6-550P-201ENST00000391057 C6orf141Q5SZD1 244 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms