RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 ARRDC2Q8TBH0 407 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 KCNG4Q8TDN1 519 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 ELP5Q8TE02 316 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 FAM216AQ8WUB2 273 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 UCMAQ8WVF2 138 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 PSPC1Q8WXF1 523 aaKnown RBP1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 GTF3C6Q969F1 213 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 FAM149B1Q96BN6 582 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 INTS12Q96CB8 462 aaKnown RBP1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 THOC3Q96J01 351 aaKnown RBP1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 TMEM68Q96MH6 324 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 SH3GL2Q99962 352 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 ZPBPQ9BS86 351 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 SEZ6LQ9BYH1 1024 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 DIAPH3Q9NSV4 1193 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 SMC4Q9NTJ3 1288 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 CISD1Q9NZ45 108 aaKnown RBP1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 EHD2Q9NZN4 543 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 DLGAP2Q9P1A6 1054 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 ORC3Q9UBD5 711 aaPredicted RBP1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 FBXO9Q9UK97 447 aaPredicted RBP1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 INTS6Q9UL03 887 aaKnown RBP1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 AGO1Q9UL18 857 aaKnown RBP1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 AAR2Q9Y312 384 aaKnown RBP1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 CEPT1Q9Y6K0 416 aa1.72□□□□□ -2.13
RNU6-440P-201ENST00000390882 IGKV2D-30A0A075B6S6 120 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 IGLV5-52A0A0A0MRZ9 124 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 A0A0U1RQJ8 604 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 FAM237BA0A1B0GVD1 139 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 DYTNA2CJ06 578 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 PI4KAP2A4QPH2 592 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 TMEM202A6NGA9 273 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 AKR1B15C9JRZ8 316 aaPredicted RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 BCAT2O15382 392 aaPredicted RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 SMAD6O43541 496 aaKnown RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 ZIC3O60481 467 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 PAGE4O60829 102 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 KCNJ13O60928 360 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 GAGE7O76087 117 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 TBX18O95935 607 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 CH25HO95992 272 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 EIF2S1P05198 315 aaKnown RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 ACAA1P09110 424 aaPredicted RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 GAGE12FP0CL80 117 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 GAGE12GP0CL81 117 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 GAGE12IP0CL82 117 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 T-ENOLP0DO92 83 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 ZNF182P17025 639 aaPredicted RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 NFKBIAP25963 317 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 C21orf33P30042 268 aaPredicted RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 HOXA11P31270 313 aaPredicted RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 HNRNPH1P31943 449 aaKnown RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 ICAM3P32942 547 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 ARL3P36405 182 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 PIGAP37287 484 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 RGS2P41220 211 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 RXRGP48443 463 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 THBS3P49746 956 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 PEX5P50542 639 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 METAP2P50579 478 aaKnown RBP eCLIP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 ECT2LQ008S8 904 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 EGR4Q05215 589 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 GRIK2Q13002 908 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 GAGE1Q13065 139 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 GAGE4Q13068 117 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 TRAF3Q13114 568 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 MAMLD1Q13495 774 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 NAE1Q13564 534 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 FRG1Q14331 258 aaKnown RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 FGFBP1Q14512 234 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 KRT32Q14532 448 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 PLCB4Q15147 1175 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 MAPRE1Q15691 268 aaKnown RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 TBCEQ15813 527 aaPredicted RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 C2orf68Q2NKX9 166 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 COL28A1Q2UY09 1125 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 USP41Q3LFD5 358 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 KRT71Q3SY84 523 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 C6orf141Q5SZD1 244 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 CCDC30Q5VVM6 783 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 GGNBP1Q5YKI7 109 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 KIAA1161Q6NSJ0 714 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 FBXL22Q6P050 247 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 FAM180BQ6P0A1 224 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 METTL2BQ6P1Q9 378 aaKnown RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 C8orf82Q6P1X6 216 aaPredicted RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 TSSK4Q6SA08 328 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 LCTLQ6UWM7 567 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 B3GNT6Q6ZMB0 384 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 C4orf50Q6ZRC1 276 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 MTSS1LQ765P7 747 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 TBC1D1Q86TI0 1168 aaPredicted RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 HAPLN4Q86UW8 402 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 FJX1Q86VR8 437 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 ZC3HC1Q86WB0 502 aaKnown RBP1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 ADSSL1Q8N142 457 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 SPATA6LQ8N4H0 392 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 TMEM116Q8NCL8 245 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 HUS1BQ8NHY5 278 aa1.71□□□□□ -2.14
RNU6-440P-201ENST00000390882 MAGEC3Q8TD91 643 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms