RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 PRPF4O43172 522 aaKnown RBP eCLIP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 SYNCRIPO60506 623 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 RSL1D1O76021 490 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 NEURL1O76050 574 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 RECQL5O94762 991 aaPredicted RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 RGS11O94810 467 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 KCNK5O95279 499 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 TRUB2O95900 331 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 MT-ND3P03897 115 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 FYNP06241 537 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 HNRNPCP07910 306 aaKnown RBP eCLIP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 HOXB5P09067 269 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 SUPT20HL2P0C7V6 817 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 AZGP1P25311 298 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CFPP27918 469 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 TACR3P29371 465 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 HOXA7P31268 230 aaPredicted RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 HOXA13P31271 388 aaPredicted RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 RYKP34925 604 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 HSPA4P34932 840 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 RFC1P35251 1148 aaPredicted RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CXCR3P49682 368 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 RAB28P51157 221 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CAPZA1P52907 286 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CDH13P55290 713 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 BPIFB3P59826 476 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 PPP2R2BQ00005 443 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 HOXA4Q00056 320 aaPredicted RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 TFAP4Q01664 338 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 MZT1Q08AG7 82 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 PMPCAQ10713 525 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 PTK6Q13882 451 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 RCN2Q14257 317 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 KRT33BQ14525 404 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 ARHGEF6Q15052 776 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 PGM5Q15124 567 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 PKN2Q16513 984 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 SNAPC1Q16533 368 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 HYAL4Q2M3T9 481 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 PCGF3Q3KNV8 242 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 SUPT20HL1Q3ZLR7 823 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 PLK5Q496M5 336 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 ESCO2Q56NI9 601 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 DNAJC21Q5F1R6 531 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 NHSL2Q5HYW2 709 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 KIAA1755Q5JYT7 1200 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 PRAMEF19Q5SWL8 479 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 VWA5B1Q5TIE3 1220 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 KRT79Q5XKE5 535 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 KIAA0895LQ68EN5 471 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 KRT39Q6A163 491 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 TMEM211Q6ICI0 200 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 HMBOX1Q6NT76 420 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 ALKBH5Q6P6C2 394 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 LRIG3Q6UXM1 1119 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 RBM44Q6ZP01 1051 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 RBPMS2Q6ZRY4 209 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 ADCK2Q7Z695 626 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CENPVQ7Z7K6 275 aaPredicted RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 AMIGO2Q86SJ2 522 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 SDCCAG8Q86SQ7 713 aaPredicted RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 UNC45BQ8IWX7 931 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 ADGRF4Q8IZF3 695 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 SYCP3Q8IZU3 236 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CCAR2Q8N163 923 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 FBXO39Q8N4B4 442 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 PARP16Q8N5Y8 322 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 IQUBQ8NA54 791 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 FAM47BQ8NA70 645 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CAMKVQ8NCB2 501 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 RBM15BQ8NDT2 890 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 BHLHE22Q8NFJ8 381 aaPredicted RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 OR4N2Q8NGD1 307 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 OR8H1Q8NGG4 311 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CTCFLQ8NI51 663 aaPredicted RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 GRK7Q8WTQ7 553 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 PTPMT1Q8WUK0 201 aaPredicted RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 SGCDQ92629 289 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 HAS1Q92839 578 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 MR1Q95460 341 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CAVIN3Q969G5 261 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 IGSF8Q969P0 613 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 FAM162AQ96A26 154 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CCDC47Q96A33 483 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 LRRC59Q96AG4 307 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 MOAP1Q96BY2 351 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 NXNL1Q96CM4 212 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 RNF183Q96D59 192 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 HDAC11Q96DB2 347 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 RRNAD1Q96FB5 475 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CABS1Q96KC9 395 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CEP295NLQ96MC4 621 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 CCDC43Q96MW1 224 aaKnown RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 INTS14Q96SY0 518 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 MGME1Q9BQP7 344 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 BDH2Q9BUT1 245 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 NUP85Q9BW27 656 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 ACAT2Q9BWD1 397 aa1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 GATA5Q9BWX5 397 aaPredicted RBP1.94□□□□□ -2.1
SNORA48.1-201ENST00000390879 PIGMQ9H3S5 423 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms