RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 KCNH1O95259 989 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 PWP1Q13610 501 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 MYBPC3Q14896 1274 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZBTB8BQ8NAP8 495 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 LPCAT1Q8NF37 534 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 SMARCD1Q96GM5 515 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 CNGB3Q9NQW8 809 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.17□□□□□ -0.33e-7■■■■□ 24.4
TRAPPC9-201ENST00000389328 RCOR3Q9P2K3 495 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 CRLS1Q9UJA2 301 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 G3V2T6 193 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 IMPDH2P12268 514 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 RPS12P25398 132 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 LMO2P25791 158 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 CAPGP40121 348 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 ADCYAP1R1P41586 468 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 IDH2P48735 452 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 HARS2P49590 506 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 EPS8Q12929 822 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 STXBP5Q5T5C0 1151 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 OGFRL1Q5TC84 451 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 C11orf74Q86VG3 221 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 SPPL2AQ8TCT8 520 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 MTFMTQ96DP5 389 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 DUSP16Q9BY84 665 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 SATB2Q9UPW6 733 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 BBIP1A8MTZ0 92 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 PDZK1P1A8MUH7 402 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 BHMG1C9JSJ3 638 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 IRF1P10914 325 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 PRKCQQ04759 706 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 SIM2Q14190 667 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 MAPKAPK3Q16644 382 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 CCNYL2Q5T2Q4 361 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 FAM45BPQ6NSW5 357 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 UGT3A1Q6NUS8 523 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 KLHL35Q6PF15 583 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 PLPPR4Q7Z2D5 763 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 SMYD1Q8NB12 490 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 GPRC5AQ8NFJ5 357 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 FAM45AQ8TCE6 357 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 TMIGD2Q96BF3 282 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZNF512Q96ME7 567 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 CATSPERZQ9NTU4 200 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 GMPPBQ9Y5P6 360 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 SNX8Q9Y5X2 465 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 SLC12A8A0AV02 714 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 CLDN25C9JDP6 229 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 HTRA2O43464 458 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 POMCP01189 267 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 ANXA6P08133 673 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 THRBP10828 461 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 OR1E1P30953 314 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 MTHFRP42898 656 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 PSMD5Q16401 504 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 CNSTQ6PJW8 725 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 GALNT5Q7Z7M9 940 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 KBTBD6Q86V97 674 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 FBXL20Q96IG2 436 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 PLEKHA8Q96JA3 519 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 GPR20Q99678 358 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 CLPBQ9H078 707 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 PDZD7Q9H5P4 517 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZNF132P52740 706 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZBED2Q9BTP6 218 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 COLEC11Q9BWP8 271 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 CHID1Q9BWS9 393 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 C20orf27Q9GZN8 174 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 EIF2B3Q9NR50 452 aaKnown RBP13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 CACNA2D2Q9NY47 1150 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 LMCD1Q9NZU5 365 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 IGSF9Q9P2J2 1179 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 PHF24Q9UPV7 400 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZNF142P52746 1687 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 PIP5K1BO14986 540 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 FAM189A1O60320 539 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 CHRNA4P43681 627 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 ARMCX4Q5H9R4 360 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 SLC44A2Q8IWA5 706 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 MAPK15Q8TD08 544 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 MTERF3Q96E29 417 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 PRICKLE1Q96MT3 831 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 GAD1Q99259 594 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 WDR12Q9GZL7 423 aaKnown RBP13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 ELOVL6Q9H5J4 265 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 KLQ9UEF7 1012 aa13.16□□□□□ -0.3
TRAPPC9-201ENST00000389328 LRIG2O94898 1065 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 OR1G1P47890 313 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 PPP3CCP48454 512 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 PTPRNQ16849 979 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZC3H12BQ5HYM0 836 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 VPS37AQ8NEZ2 397 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 S100ZQ8WXG8 99 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 PPP1R14BQ96C90 147 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 FBRSL1Q9HCM7 1045 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZNF197O14709 1029 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 SNPHO15079 494 aa13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZNF182P17025 639 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC9-201ENST00000389328 SLC1A2P43004 574 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms