RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 LRRC38Q5VT99 294 aa12.45□□□□□ -0.42
SRGAP3-202ENST00000383836 PHACTR4Q8IZ21 702 aa12.45□□□□□ -0.42
SRGAP3-202ENST00000383836 CNTD1Q8N815 330 aa12.45□□□□□ -0.42
SRGAP3-202ENST00000383836 ROBO2Q9HCK4 1378 aa12.45□□□□□ -0.42
SRGAP3-202ENST00000383836 RCCD1A6NED2 376 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 DYNC1LI2O43237 492 aaPredicted RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 CPNE3O75131 537 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 REM1O75628 298 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 FTH1P02794 183 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 ARF4P18085 180 aaPredicted RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 NTRK3Q16288 839 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 PPM1LQ5SGD2 360 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 PIGWQ7Z7B1 504 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 NKAPQ8N5F7 415 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 FCGR1BQ92637 280 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 RFT1Q96AA3 541 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 ERLEC1Q96DZ1 483 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 CELF6Q96J87 481 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 DHX33Q9H6R0 707 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 HIST1H2ABP04908 130 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 DGKAP23743 735 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 ZNF135P52742 658 aaPredicted RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 TXNDC11Q6PKC3 985 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 HIST3H2AQ7L7L0 130 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 PTGR2Q8N8N7 351 aaPredicted RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 HIST1H2ACQ93077 130 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 FNDC11Q9BVV2 318 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 KLHL33A6NCF5 533 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 CYB561D2O14569 222 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 TULP3O75386 442 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 PAEPP09466 180 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 STAG3L1P0CL83 205 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 EPORP19235 508 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 AZGP1P25311 298 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 LHX1P48742 406 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 CEBPGP53567 150 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 RASSF1Q9NS23 344 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 ZBTB14O43829 449 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 TKTL1P51854 596 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 RPL26P61254 145 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 RHOAP61586 193 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 GRSF1Q12849 480 aaKnown RBP eCLIP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 AFTPHQ6ULP2 937 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 SVOPLQ8N434 492 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 OR52K1Q8NGK4 314 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 TOP1MTQ969P6 601 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 SLC35C1Q96A29 364 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 NKIRAS2Q9NYR9 191 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 GAKO14976 1311 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 NDUFB5O43674 189 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 RXRBP28702 533 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 KLF10Q13118 480 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 TRIM40Q6P9F5 258 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 GK5Q6ZS86 529 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 MPP5Q8N3R9 675 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 ZNF615Q8N8J6 731 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 EBNA1BP2Q99848 306 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 GIT1Q9Y2X7 761 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 A0A1W2PPM1 405 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 FAM86B1E9PN63 330 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 ULK1O75385 1050 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 NTSP30990 170 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 BIKQ13323 160 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 TMEM119Q4V9L6 283 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 R3HCC1LQ7Z5L2 792 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 RBM12BQ8IXT5 1001 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 LRRC4CQ9HCJ2 640 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 UPB1Q9UBR1 384 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 NARFQ9UHQ1 456 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 MGAT4AQ9UM21 535 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 AKAP8O43823 692 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 TRIM3O75382 744 aaPredicted RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 RORCP51449 518 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 MAPK12P53778 367 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 SLC12A3P55017 1021 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 PSMD5Q16401 504 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 MIIPQ5JXC2 388 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 SPATA19Q7Z5L4 167 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 NT5DC4Q86YG4 428 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 PHC2Q8IXK0 858 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 PANX1Q96RD7 426 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 ZNF607Q96SK3 696 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 CADM1Q9BY67 442 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 BHLHE41Q9C0J9 482 aaPredicted RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 PDP1Q9P0J1 537 aaPredicted RBP12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 VPS28Q9UK41 221 aa12.44□□□□□ -0.42
SRGAP3-202ENST00000383836 OR6C70A6NIJ9 312 aa12.43□□□□□ -0.42
SRGAP3-202ENST00000383836 SIGLEC16A6NMB1 481 aa12.43□□□□□ -0.42
SRGAP3-202ENST00000383836 F8VP50 259 aa12.43□□□□□ -0.42
SRGAP3-202ENST00000383836 RFXANKO14593 260 aa12.43□□□□□ -0.42
SRGAP3-202ENST00000383836 ALOX15BO15296 676 aa12.43□□□□□ -0.42
SRGAP3-202ENST00000383836 NR4A1P22736 598 aa12.43□□□□□ -0.42
SRGAP3-202ENST00000383836 CBWD6Q4V339 395 aa12.43□□□□□ -0.42
SRGAP3-202ENST00000383836 RNASE12Q5GAN4 147 aaKnown RBP12.43□□□□□ -0.42
SRGAP3-202ENST00000383836 MIB1Q86YT6 1006 aa12.43□□□□□ -0.42
SRGAP3-202ENST00000383836 CARNMT1Q8N4J0 409 aa12.43□□□□□ -0.42
SRGAP3-202ENST00000383836 OR2T12Q8NG77 320 aa12.43□□□□□ -0.42
SRGAP3-202ENST00000383836 CCDC177Q9NQR7 707 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms