RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 ARL14Q8N4G2 192 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 NPWQ8N729 165 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 OR56A4Q8NGH8 313 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 WDR36Q8NI36 951 aaKnown RBP13.04□□□□□ -0.32
RPAIN-202ENST00000381208 TSACCQ96A04 125 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-202ENST00000381208 FCRL3Q96P31 734 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-202ENST00000381208 NUDCD1Q96RS6 583 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 CCDC3Q9BQI4 270 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.04□□□□□ -0.32
RPAIN-202ENST00000381208 WDR26Q9H7D7 661 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.04□□□□□ -0.32
RPAIN-202ENST00000381208 GULP1Q9UBP9 304 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 LCMT1Q9UIC8 334 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 PNMA8BQ9ULN7 279 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-202ENST00000381208 GPR34Q9UPC5 381 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 OR1A2Q9Y585 309 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 ENTPD2Q9Y5L3 495 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 RP1P56715 2156 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 CCDC187A0A096LP49 1063 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 MYO1FO00160 1098 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 PSMD11O00231 422 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 SERPING1P05155 500 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 CYP2A6P11509 494 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-202ENST00000381208 SKILP12757 684 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 PNLIPP16233 465 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 TMPRSS3P57727 454 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 ZBED6P86452 979 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 RALGDSQ12967 914 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
RPAIN-202ENST00000381208 PERM1Q5SV97 790 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 RD3Q7Z3Z2 195 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 ZSWIM9Q86XI8 627 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 ATPAF2Q8N5M1 289 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 PCDH19Q8TAB3 1148 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 KCNE4Q8WWG9 221 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 HSPH1Q92598 858 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 LIN37Q96GY3 246 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-202ENST00000381208 TMEM74Q96NL1 305 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 SLC46A1Q96NT5 459 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 CSPG4P5Q96PW8 444 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 MGME1Q9BQP7 344 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 STRADBQ9C0K7 418 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 CAAP1Q9H8G2 361 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 ASCL3Q9NQ33 180 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 PHTF1Q9UMS5 762 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 SATB2Q9UPW6 733 aa13.03□□□□□ -0.32
RPAIN-202ENST00000381208 SMG1Q96Q15 3661 aaKnown RBP13.02□□□□□ -0.33
RPAIN-202ENST00000381208 CAPN8A6NHC0 703 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 GOLGA6L19H0YKK7 550 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 NTN3O00634 580 aaPredicted RBP13.02□□□□□ -0.33
RPAIN-202ENST00000381208 ATXN7O15265 892 aaPredicted RBP13.02□□□□□ -0.33
RPAIN-202ENST00000381208 ZW10O43264 779 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 TPM3P06753 285 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 RARAP10276 462 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 GLB1P16278 677 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 CR2P20023 1033 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 AMPD1P23109 780 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 CES1P23141 567 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 IL1R2P27930 398 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 TEAD1P28347 426 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 UBASH3AP57075 661 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 FANCCQ00597 558 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 SLC10A7Q0GE19 358 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 ACOX1Q15067 660 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 SMTNL2Q2TAL5 461 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 C3orf38Q5JPI3 329 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 MARC1Q5VT66 337 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 HGSNATQ68CP4 663 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 PNCKQ6P2M8 343 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 ARHGAP36Q6ZRI8 547 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 USP45Q70EL2 814 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 KIAA1524Q8TCG1 905 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 FUBP1Q96AE4 644 aaKnown RBP13.02□□□□□ -0.33
RPAIN-202ENST00000381208 ATXN7L3BQ96GX2 97 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 GFM1Q96RP9 751 aaKnown RBP13.02□□□□□ -0.33
RPAIN-202ENST00000381208 FUCA2Q9BTY2 467 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 PHPT1Q9NRX4 125 aaPredicted RBP13.02□□□□□ -0.33
RPAIN-202ENST00000381208 ANAPC7Q9UJX3 599 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 APPL1Q9UKG1 709 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 DNPEPQ9ULA0 475 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 CAPN11Q9UMQ6 739 aa13.02□□□□□ -0.33
RPAIN-202ENST00000381208 LUC7L2Q9Y383 392 aaKnown RBP13.02□□□□□ -0.33
RPAIN-202ENST00000381208 MAFKO60675 156 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 PEX11BO96011 259 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 CPP00450 1065 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 PRKCGP05129 697 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 CYP1A2P05177 515 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 PTMSP20962 102 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 VIPR1P32241 457 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 PBX1P40424 430 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 MMP13P45452 471 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 RHDQ02161 417 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 KRT81Q14533 505 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 ARMC12Q5T9G4 340 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 TIGD7Q6NT04 549 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-202ENST00000381208 OGFOD3Q6PK18 319 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 TAF8Q7Z7C8 310 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 KYQ8NBH2 561 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 GPR156Q8NFN8 814 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 TMEM159Q96B96 161 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms