RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PELI3Q8N2H9 469 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 GPR156Q8NFN8 814 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 OR6C4Q8NGE1 309 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 CCDC97Q96F63 343 aaPredicted RBP16.92■□□□□ 0.3
SMN2-201ENST00000380741 BPIFA3Q9BQP9 254 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 FOXP3Q9BZS1 431 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 ZWILCHQ9H900 591 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 EPB41L5Q9HCM4 733 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 TMEM63CQ9P1W3 806 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 MYO1AQ9UBC5 1043 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 SEPT3Q9UH03 358 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 SCINQ9Y6U3 715 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 COL6A6A6NMZ7 2263 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 PLD2O14939 933 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 TCF4P15884 667 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 IL1R2P27930 398 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 TRIM23P36406 574 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 RENBPP51606 427 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 CFHR1Q03591 330 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 VAC14Q08AM6 782 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 KLHL30Q0D2K2 578 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 ACOX1Q15067 660 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 SMTNL2Q2TAL5 461 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 FILIP1LQ4L180 1135 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 TMCO4Q5TGY1 634 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 TAF8Q7Z7C8 310 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 SFTPA2Q8IWL1 248 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 LZTR1Q8N653 840 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 FAM46DQ8NEK8 389 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 SNRNP27Q8WVK2 155 aaKnown RBP16.91■□□□□ 0.3
SMN2-201ENST00000380741 ZNF599Q96NL3 588 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 LGR4Q9BXB1 951 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 TMEM168Q9H0V1 697 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 LRRN3Q9H3W5 708 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 WDR26Q9H7D7 661 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 B4GALT6Q9UBX8 382 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 AHCTF1Q8WYP5 2266 aa16.91■□□□□ 0.3
SMN2-201ENST00000380741 A0A1W2PQC6 194 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 H3BRJ5 948 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 TNFRSF10CO14798 259 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 NOBOXO60393 691 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 PEX11BO96011 259 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 HOXC4P09017 264 aaPredicted RBP16.9■□□□□ 0.3
SMN2-201ENST00000380741 SKILP12757 684 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 KELP23276 732 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 PCK1P35558 622 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 INHBCP55103 352 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 CLN3Q13286 438 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 EIF3IQ13347 325 aaKnown RBP16.9■□□□□ 0.3
SMN2-201ENST00000380741 ZNF235Q14590 738 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 DPYSL2Q16555 572 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 CERCAMQ5T4B2 595 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 PNCKQ6P2M8 343 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 OGFOD3Q6PK18 319 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 RAB11FIP2Q7L804 512 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 CCNJLQ8IV13 435 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 FBXO39Q8N4B4 442 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 Q8N9G6 341 aaPredicted RBP16.9■□□□□ 0.3
SMN2-201ENST00000380741 SPOCK2Q92563 424 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 TRIM11Q96F44 468 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 COQ10AQ96MF6 247 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 NAP1L5Q96NT1 182 aaPredicted RBP16.9■□□□□ 0.3
SMN2-201ENST00000380741 STRADBQ9C0K7 418 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 CYP4F12Q9HCS2 524 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 MRPL47Q9HD33 250 aaKnown RBP16.9■□□□□ 0.3
SMN2-201ENST00000380741 ETNK2Q9NVF9 386 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 PCDHGC4Q9Y5F7 938 aa16.9■□□□□ 0.3
SMN2-201ENST00000380741 A0A1B0GTH6 734 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.89■□□□□ 0.29
SMN2-201ENST00000380741 SMTNL1A8MU46 457 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 B4DGG1 531 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 TMX2-CTNND1H3BSU7 103 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 HTRA2O43464 458 aaPredicted RBP16.89■□□□□ 0.29
SMN2-201ENST00000380741 MYBL1P10243 752 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 HGFP14210 728 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 GLB1P16278 677 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 CR2P20023 1033 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 AMPD1P23109 780 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 CCKBRP32239 447 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 UGT1A5P35504 534 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 ARL4AP40617 200 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 CNGA3Q16281 694 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 TMCO3Q6UWJ1 677 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 POLNQ7Z5Q5 900 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 PGBD5Q8N414 524 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 CCL4L1Q8NHW4 92 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 PDCD6IPQ8WUM4 868 aaKnown RBP16.89■□□□□ 0.29
SMN2-201ENST00000380741 HSPH1Q92598 858 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 TTC9Q92623 222 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 NUS1Q96E22 293 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 WBP1Q96G27 269 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 ISCUQ9H1K1 167 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMN2-201ENST00000380741 MOSPD1Q9UJG1 213 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 APPL1Q9UKG1 709 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 ATXN7L1Q9ULK2 861 aaPredicted RBP16.89■□□□□ 0.29
SMN2-201ENST00000380741 PIEZO2Q9H5I5 2752 aa16.89■□□□□ 0.29
SMN2-201ENST00000380741 PRSS38A1L453 326 aa16.88■□□□□ 0.29
SMN2-201ENST00000380741 K7ENP7 123 aa16.88■□□□□ 0.29
SMN2-201ENST00000380741 SOCS5O75159 536 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms