RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 LRRC57Q8N9N7 239 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 ACRBPQ8NEB7 543 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 EXD1Q8NHP7 514 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.06■□□□□ 0.32
RER1-202ENST00000378512 LRRN4Q8WUT4 740 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 HNRNPLLQ8WVV9 542 aaKnown RBP17.06■□□□□ 0.32
RER1-202ENST00000378512 COQ10AQ96MF6 247 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 ZNF830Q96NB3 372 aaPredicted RBP17.06■□□□□ 0.32
RER1-202ENST00000378512 MAK16Q9BXY0 300 aaKnown RBP17.06■□□□□ 0.32
RER1-202ENST00000378512 UCKL1Q9NWZ5 548 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 B4GALT6Q9UBX8 382 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 KLF15Q9UIH9 416 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 PNMA8BQ9ULN7 279 aaPredicted RBP17.06■□□□□ 0.32
RER1-202ENST00000378512 HEY1Q9Y5J3 304 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 RAI2Q9Y5P3 530 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 LOC400499M0QZD8 3231 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 CACNA1GO43497 2377 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 hCG_1818297A0A087WSY0 165 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 RFPL3O75679 317 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 RECQL5O94762 991 aaPredicted RBP17.05■□□□□ 0.32
RER1-202ENST00000378512 ZRANB2O95218 330 aaKnown RBP eCLIP17.05■□□□□ 0.323e-7■■■■□ 21
RER1-202ENST00000378512 CPP00450 1065 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 PRLP01236 227 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 MMP2P08253 660 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 PDHA1P08559 390 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 ELFN1P0C7U0 828 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 HNRNPKP61978 463 aaKnown RBP eCLIP17.05■□□□□ 0.321e-7■■■■■ 34.1
RER1-202ENST00000378512 SEMG2Q02383 582 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 DSC2Q02487 901 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 NIPAL4Q0D2K0 466 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 ZBTB17Q13105 803 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 PDE1CQ14123 709 aaPredicted RBP17.05■□□□□ 0.32
RER1-202ENST00000378512 TFDP2Q14188 446 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 PPP2R5EQ16537 467 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 ARMC12Q5T9G4 340 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 MACC1Q6ZN28 852 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 DAAM2Q86T65 1068 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 RCOR2Q8IZ40 523 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 CCNYQ8ND76 341 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 KRT35Q92764 455 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 TBATAQ96M53 351 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 TDRD1Q9BXT4 1180 aaKnown RBP17.05■□□□□ 0.32
RER1-202ENST00000378512 HAUS2Q9NVX0 235 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 PCDHA3Q9Y5H8 950 aa17.05■□□□□ 0.32
RER1-202ENST00000378512 KCNK1O00180 336 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 PSMD11O00231 422 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 PPP1R12AO14974 1030 aaPredicted RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 HEXIM1O94992 359 aaKnown RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 MYF5P13349 255 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 KRT10P13645 584 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 TGM2P21980 687 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 LHCGRP22888 699 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 VIPR1P32241 457 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 TRIM23P36406 574 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 MTM1Q13496 603 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 PTK2BQ14289 1009 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 PRKD1Q15139 912 aaPredicted RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 CNGA3Q16281 694 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 PROX2Q3B8N5 592 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 ZNF542PQ5EBM4 170 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 RFX6Q8HWS3 928 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 OR4C6Q8NH72 309 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 TADA1Q96BN2 335 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 CRELD1Q96HD1 420 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 KCTD5Q9NXV2 234 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.04■□□□□ 0.32
RER1-202ENST00000378512 PCDHGA1Q9Y5H4 931 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 CSNK1G3Q9Y6M4 447 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 A0A0J9YYE9 177 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 NPIPB15A6NHN6 443 aaPredicted RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 SIGLEC6O43699 453 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 LZTS3O60299 673 aaPredicted RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 CST8O60676 142 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 JCHAINP01591 159 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 TRBC1P01850 177 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 HOXC4P09017 264 aaPredicted RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 TNNT1P13805 278 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 NFKBIAP25963 317 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 CTNNA2P26232 953 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 COPS2P61201 443 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 RPL26P61254 145 aaKnown RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 ZNF211Q13398 564 aaPredicted RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 INPP5AQ14642 412 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 SLC14A2Q15849 920 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 ODF2Q5BJF6 829 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 HES3Q5TGS1 186 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 ESRP1Q6NXG1 681 aaKnown RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 BZW1Q7L1Q6 419 aaKnown RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 TMPRSS12Q86WS5 348 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 SPC24Q8NBT2 197 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 PDCD6IPQ8WUM4 868 aaKnown RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 RBM41Q96IZ5 413 aaKnown RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 LYSMD1Q96S90 227 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 APOOQ9BUR5 198 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 DNAJC28Q9NX36 388 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 RPL26L1Q9UNX3 145 aaKnown RBP17.04■□□□□ 0.32
RER1-202ENST00000378512 EFR3BQ9Y2G0 817 aa17.04■□□□□ 0.32
RER1-202ENST00000378512 GRID2IPA4D2P6 1211 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 SCAMP1O15126 338 aa17.03■□□□□ 0.32
RER1-202ENST00000378512 FFAR2O15552 330 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms