RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 PRMT5O14744 637 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 AOC2O75106 756 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 SLC7A2P52569 658 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 GK5Q6ZS86 529 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 GPRIN3Q6ZVF9 776 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 TRIM48Q8IWZ4 208 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 ZDHHC14Q8IZN3 488 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 RP9Q8TA86 221 aaKnown RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 RIN3Q8TB24 985 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 FBXO30Q8TB52 745 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 RDH11Q8TC12 318 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 SPPL2AQ8TCT8 520 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 NTAN1Q96AB6 310 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 COPS8Q99627 209 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 TNKS2Q9H2K2 1166 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 R3HDMLQ9H3Y0 253 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 SCHIP1Q9P0W5 487 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 AP4S1Q9Y587 144 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 TEX264Q9Y6I9 313 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 CHD4Q14839 1912 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 EME2A4GXA9 379 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 NEDD8-MDP1E9PL57 170 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 IFRD1O00458 451 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 RGS14O43566 566 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 IL1BP01584 269 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 CATP04040 527 aaKnown RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 PKMP14618 531 aaKnown RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 ANPEPP15144 967 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 CDH5P33151 784 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 CCT8P50990 548 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 MPP2Q14168 576 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 KCNJ11Q14654 390 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 PREPLQ4J6C6 727 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 NPAS4Q8IUM7 802 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 FAM9CQ8IZT9 166 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 OTUB1Q96FW1 271 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 PAAF1Q9BRP4 392 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 TEX12Q9BXU0 123 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 GABRQQ9UN88 632 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 SYN3O14994 580 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 CLOCKO15516 846 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 TCEA3O75764 348 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 STBD1O95210 358 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 EOMESO95936 686 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 ECHS1P30084 290 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 CLK1P49759 484 aaKnown RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 FAM98BQ52LJ0 330 aaKnown RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 SERPINA13PQ6UXR4 307 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 NET1Q7Z628 596 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 NPY6RQ99463 290 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 ZFYVE1Q9HBF4 777 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 SCN3BQ9NY72 215 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 PADI4Q9UM07 663 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 DEAF1O75398 565 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 RPP40O75818 363 aaKnown RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 CHRNGP07510 517 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 IRX1P78414 480 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-203ENST00000378169 IRF9Q00978 393 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 ZFP1Q6P2D0 407 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 ADAMTSL2Q86TH1 951 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 TMEM199Q8N511 208 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 SUSD6Q92537 303 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 COMMD8Q9NX08 183 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 TAS2R1Q9NYW7 299 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 DPP7Q9UHL4 492 aa13.22□□□□□ -0.29
NPHP4-203ENST00000378169 PIRO00625 290 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 FAM58BPP0C7Q3 252 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 PPIDQ08752 370 aaKnown RBP13.21□□□□□ -0.29
NPHP4-203ENST00000378169 TSTD2Q5T7W7 516 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 FBXL22Q6P050 247 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 SYT12Q8IV01 421 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 HEXDCQ8WVB3 486 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 AUTS2Q8WXX7 1259 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 CCSER2Q9H7U1 834 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 SYNDIG1Q9H7V2 258 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 NMUR1Q9HB89 426 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 FAM53CQ9NYF3 392 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 GNPTGQ9UJJ9 305 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 FCF1Q9Y324 198 aaKnown RBP13.21□□□□□ -0.29
NPHP4-203ENST00000378169 CPQQ9Y646 472 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 CACNA1SQ13698 1873 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 A0A1B0GVM2 712 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 TCAF2A6NFQ2 919 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 M0R3G1 203 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 MLYCDO95822 493 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 HLA-DQB2P05538 268 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 HOXA11P31270 313 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-203ENST00000378169 ABRQ12979 859 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 PRKG2Q13237 762 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 SLC9A4Q6AI14 798 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 BDH2Q9BUT1 245 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 ROGDIQ9GZN7 287 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 SPAG4Q9NPE6 437 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 INVSQ9Y283 1065 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 TJP1Q07157 1748 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 NPEPPSL1A6NEC2 478 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 CYP2A6P11509 494 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-203ENST00000378169 SLC1A2P43004 574 aa13.21□□□□□ -0.29
NPHP4-203ENST00000378169 MAPK8P45983 427 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms