RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ANXA9O76027 345 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 LRIG2O94898 1065 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 RASAL1O95294 804 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 NCAM1P13591 858 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 HSD17B1P14061 328 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 ETFBP38117 255 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 ZNF135P52742 658 aaPredicted RBP21.21■□□□□ 0.99
UPF3A-202ENST00000375299 KIF19Q2TAC6 998 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 TMEM26Q6ZUK4 368 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 COLGALT2Q8IYK4 626 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 CMTR2Q8IYT2 770 aaKnown RBP21.21■□□□□ 0.99
UPF3A-202ENST00000375299 C19orf60Q96EN9 201 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 C8orf4Q9NR00 106 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 PAIP2BQ9ULR5 123 aaKnown RBP21.21■□□□□ 0.99
UPF3A-202ENST00000375299 OAZ3Q9UMX2 235 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 GINS2Q9Y248 185 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 NDUFAF1Q9Y375 327 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 CLIC3O95833 236 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 INHBBP09529 407 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 ZNF12P17014 697 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 C21orf59P57076 290 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 CCNA1P78396 465 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 ZNF33AQ06730 810 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 SPIDRQ14159 915 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 TMTC4Q5T4D3 741 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 SULF1Q8IWU6 871 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 ADGRG5Q8IZF4 528 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 PLEKHA8Q96JA3 519 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 MYRFLQ96LU7 910 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 TRMOQ9BU70 441 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 COLEC11Q9BWP8 271 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 MROH8Q9H579 483 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 GOLGA2P5Q9HBQ8 144 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 TBC1D13Q9NVG8 400 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 ACTR3BQ9P1U1 418 aa21.21■□□□□ 0.99
UPF3A-202ENST00000375299 BPTFQ12830 3046 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 SMIM28A0A1B0GU29 152 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 TRIM64BA6NI03 449 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 ACOX3O15254 700 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 RABGGTBP53611 331 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 FGD3Q5JSP0 725 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 ARHGAP36Q6ZRI8 547 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 SLC15A3Q8IY34 581 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 MINDY1Q8N5J2 469 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 DDHD1Q8NEL9 900 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 DCPSQ96C86 337 aaKnown RBP21.2■□□□□ 0.98
UPF3A-202ENST00000375299 C3orf30Q96M34 536 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 TKTL2Q9H0I9 626 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 FADS3Q9Y5Q0 445 aa21.2■□□□□ 0.98
UPF3A-202ENST00000375299 IMPDH1P20839 514 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 CD247P20963 164 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 ACAP2Q15057 778 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 TGFBIQ15582 683 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 MARCH8Q5T0T0 291 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 NEPROQ6NW34 567 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 NOTUMQ6P988 496 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 KIAA0408Q6ZU52 694 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 MOB2Q70IA6 237 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 ANKRD13AQ8IZ07 590 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.19■□□□□ 0.98
UPF3A-202ENST00000375299 WDCPQ9H6R7 721 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 GLOD4Q9HC38 313 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 KLK14Q9P0G3 267 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 KCNH4Q9UQ05 1017 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 ASB14A6NK59 587 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 MYL3P08590 195 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 FAM163BP0C2L3 166 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 OXTRP30559 389 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 CAPGP40121 348 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 PSMD7P51665 324 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 GEMP55040 296 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 TMEM62Q0P6H9 643 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 GRIK4Q16099 956 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 ZNF789Q5FWF6 425 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 XKR5Q6UX68 686 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 DCDC5Q6ZRR9 648 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 KCTD8Q6ZWB6 473 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 OFCC1Q8IZS5 231 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 TOP6BLQ8N6T0 577 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 C16orf70Q9BSU1 422 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 CMTM6Q9NX76 183 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 COQ6Q9Y2Z9 468 aa21.19■□□□□ 0.98
UPF3A-202ENST00000375299 UNCXA6NJT0 531 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 DFFAO00273 331 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 EI24O14681 340 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 SUPT7LO94864 414 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 TSPAN8P19075 237 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 CCNCP24863 283 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 ADRA1AP35348 466 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 CCR3P51677 355 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 CLCN5P51795 746 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 PHEXP78562 749 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 RELAQ04206 551 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 SOX4Q06945 474 aaPredicted RBP21.18■□□□□ 0.98
UPF3A-202ENST00000375299 SEPT6Q14141 434 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 PDCD4Q53EL6 469 aaKnown RBP21.18■□□□□ 0.98
UPF3A-202ENST00000375299 DHRSXQ8N5I4 330 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 NAA50Q9GZZ1 169 aaKnown RBP21.18■□□□□ 0.98
UPF3A-202ENST00000375299 AKTIPQ9H8T0 292 aa21.18■□□□□ 0.98
UPF3A-202ENST00000375299 SPON1Q9HCB6 807 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms