RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 C2orf69Q8N8R5 385 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 CDYL2Q8N8U2 506 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 SAMHD1Q9Y3Z3 626 aaKnown RBP10.22□□□□□ -0.77
PTCH1-204ENST00000375290 TSC22D2O75157 780 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 BACE1P56817 501 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 LAMTOR4Q0VGL1 99 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 PJA1Q8NG27 643 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 PCDHGA3Q9Y5H0 932 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 FADS2P1A8MWK0 482 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 IFNGP01579 166 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 CATP04040 527 aaKnown RBP10.21□□□□□ -0.77
PTCH1-204ENST00000375290 UBAP2LQ14157 1087 aaKnown RBP10.21□□□□□ -0.77
PTCH1-204ENST00000375290 C10orf82Q8WW14 230 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 LRRC3Q9BY71 257 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 CHKBQ9Y259 395 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 SNCAIPQ9Y6H5 919 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 ARHGEF33A8MVX0 844 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 BTN3A1O00481 513 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 ASS1P00966 412 aaKnown RBP10.21□□□□□ -0.77
PTCH1-204ENST00000375290 MMP10P09238 476 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 ITGAXP20702 1163 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 IDH2P48735 452 aaKnown RBP10.21□□□□□ -0.77
PTCH1-204ENST00000375290 SPESP1Q6UW49 350 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 ATG14Q6ZNE5 492 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 LNX1Q8TBB1 728 aaPredicted RBP10.21□□□□□ -0.77
PTCH1-204ENST00000375290 SERAC1Q96JX3 654 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 SLCO1B3Q9NPD5 702 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 HSPE1-MOB4S4R3N1 261 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 BMP7P18075 431 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 PPATQ06203 517 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 VPS26BQ4G0F5 336 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 PYDC2Q56P42 97 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 VWA5B1Q5TIE3 1220 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF280DQ6N043 979 aa10.21□□□□□ -0.77
PTCH1-204ENST00000375290 CCDC177Q9NQR7 707 aaPredicted RBP10.21□□□□□ -0.77
PTCH1-204ENST00000375290 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.21□□□□□ -0.78
PTCH1-204ENST00000375290 CAPN8A6NHC0 703 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 MICAL2O94851 1124 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 RHOAP61586 193 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 USP45Q70EL2 814 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 OR2B2Q9GZK3 357 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 CMTM6Q9NX76 183 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 DNAJB9Q9UBS3 223 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 RAD17O75943 681 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 CLPXO76031 633 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 UROSP10746 265 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 COX7A2P14406 83 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 MZF1P28698 734 aaPredicted RBP10.21□□□□□ -0.78
PTCH1-204ENST00000375290 KHDC1Q4VXA5 237 aaKnown RBP10.21□□□□□ -0.78
PTCH1-204ENST00000375290 SYNE4Q8N205 404 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 TEX47Q8TBZ9 253 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 REXO5Q96IC2 774 aaKnown RBP10.21□□□□□ -0.78
PTCH1-204ENST00000375290 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.21□□□□□ -0.78
PTCH1-204ENST00000375290 MMP27Q9H306 513 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 C17orf102A2RUQ5 167 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 DFNA5O60443 496 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 TFEBP19484 476 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 GRIA2P42262 883 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 ECT2LQ008S8 904 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 GLT6D1Q7Z4J2 308 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 DCAKDQ8WVC6 231 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 DDX17Q92841 729 aaKnown RBP10.21□□□□□ -0.78
PTCH1-204ENST00000375290 ADAMTS10Q9H324 1103 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 CYP4F12Q9HCS2 524 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 ENTPD4Q9Y227 616 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 COL1A2P08123 1366 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 RPTORQ8N122 1335 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 ZNF99A8MXY4 864 aaPredicted RBP10.21□□□□□ -0.78
PTCH1-204ENST00000375290 ACOT1Q86TX2 421 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 LRRC71Q8N4P6 559 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 TIFAQ96CG3 184 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 MED28Q9H204 178 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 DSN1Q9H410 356 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 KCTD5Q9NXV2 234 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 SNTG2Q9NY99 539 aa10.21□□□□□ -0.78
PTCH1-204ENST00000375290 PLIN4Q96Q06 1357 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 BTBD19C9JJ37 291 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 AXIN1O15169 862 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 RHOCP08134 193 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 ANXA8P13928 327 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 ARHGDIBP52566 201 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 PUDPQ08623 228 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 Q3C1V9 767 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 FRMD7Q6ZUT3 714 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 HS6ST3Q8IZP7 471 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 PHF21BQ96EK2 531 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 ELOVL7A1L3X0 281 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 URADA6NGE7 173 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 MYCP01106 439 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-204ENST00000375290 FABP3P05413 133 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 QPCTQ16769 361 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 ACOX2Q99424 681 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 TRPV5Q9NQA5 729 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 FAM172BPA6NC97 362 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 OR14I1A6ND48 311 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 LTFP02788 710 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 CFL1P23528 166 aaKnown RBP10.2□□□□□ -0.78
PTCH1-204ENST00000375290 SLC6A2P23975 617 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 ASTE1Q2TB18 679 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-204ENST00000375290 SLITRK4Q8IW52 837 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms