RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PTTG2Q9NZH5 202 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 ZNHIT2Q9UHR6 403 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 TCRBV7S3A2A0A539 114 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 PAGE1O75459 146 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 CATP04040 527 aaKnown RBP11.57□□□□□ -0.56
PTCH1-203ENST00000375274 IL1R2P27930 398 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 SATL1Q86VE3 508 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 PROSER1Q86XN7 944 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 KRT78Q8N1N4 520 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 LEMD2Q8NC56 503 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 S100ZQ8WXG8 99 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 OSBPL6Q9BZF3 934 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 GBA3Q9H227 469 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 BPIFA1Q9NP55 256 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 SAMHD1Q9Y3Z3 626 aaKnown RBP11.57□□□□□ -0.56
PTCH1-203ENST00000375274 FAM149AA5PLN7 773 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 PLSCR1O15162 318 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 ZNF37AP17032 561 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-203ENST00000375274 POLD2P49005 469 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 MPP1Q00013 466 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 VPS26BQ4G0F5 336 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 SH3PXD2AQ5TCZ1 1133 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 GLYATQ6IB77 296 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 KIAA0408Q6ZU52 694 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 CYP4Z2PQ8N1L4 340 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 AZIN2Q96A70 460 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 MCRS1Q96EZ8 462 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 REXO5Q96IC2 774 aaKnown RBP11.56□□□□□ -0.56
PTCH1-203ENST00000375274 C2orf49Q9BVC5 232 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-203ENST00000375274 EHD3Q9NZN3 535 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 MOXD2PA6NHM9 499 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 NADKO95544 446 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-203ENST00000375274 HPCAL1P37235 193 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 ANO7Q6IWH7 933 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 GPC2Q8N158 579 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 UBASH3BQ8TF42 649 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 TRIM63Q969Q1 353 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 LINGO1Q96FE5 620 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 TM6SF2Q9BZW4 377 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 EPB41L4BQ9H329 900 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 CAPN10Q9HC96 672 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 PNPLA8Q9NP80 782 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 KRCC1Q9NPI7 259 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-203ENST00000375274 CFHP08603 1231 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 HOXC6P09630 235 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 SERPINA4P29622 427 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 WEE1P30291 646 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 RPL9P32969 192 aaKnown RBP11.56□□□□□ -0.56
PTCH1-203ENST00000375274 IL12RB1P42701 662 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 GPD2P43304 727 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 ITGA1P56199 1179 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 SPIDRQ14159 915 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 GALNT3Q14435 633 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 INTS6LQ5JSJ4 861 aaKnown RBP11.56□□□□□ -0.56
PTCH1-203ENST00000375274 PPP1R15BQ5SWA1 713 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 GPR158Q5T848 1215 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 C9orf131Q5VYM1 1079 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 LBX2Q6XYB7 198 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 SPATA22Q8NHS9 363 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 PTCD2Q8WV60 388 aaKnown RBP11.56□□□□□ -0.56
PTCH1-203ENST00000375274 PROX1Q92786 737 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 ZNF570Q96NI8 536 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 OR52E6Q96RD3 313 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 MTFR1LQ9H019 292 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 U3KQV3 271 aa11.56□□□□□ -0.56
PTCH1-203ENST00000375274 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-203ENST00000375274 DHX15O43143 795 aaKnown RBP11.55□□□□□ -0.56
PTCH1-203ENST00000375274 DMPKQ09013 629 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 CLEC6AQ6EIG7 209 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 LPPQ93052 612 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 PDZD7Q9H5P4 517 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 FAM124BQ9H5Z6 455 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-203ENST00000375274 IKZF3Q9UKT9 509 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 LRIG2O94898 1065 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 CRATP43155 626 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 CDC42P60953 191 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 CA9Q16790 459 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 LRTOMTQ8WZ04 291 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 NACC2Q96BF6 587 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 KLRG1Q96E93 195 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 DEPDC7Q96QD5 511 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 HDHD2Q9H0R4 259 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 CXorf21Q9HAI6 301 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 SMPD3Q9NY59 655 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-203ENST00000375274 GNPTGQ9UJJ9 305 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 TRIM43BA6NCK2 446 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 PRR23AA6NEV1 266 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 MT-ND1P03886 318 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 PAICSP22234 425 aaKnown RBP11.55□□□□□ -0.56
PTCH1-203ENST00000375274 ICAM3P32942 547 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 GPX6P59796 221 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 ADGRE1Q14246 886 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 ZNF846Q147U1 533 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 ANGPT1Q15389 498 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 ESRP1Q6NXG1 681 aaKnown RBP11.55□□□□□ -0.56
PTCH1-203ENST00000375274 CXCL17Q6UXB2 119 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 EPHX4Q8IUS5 362 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 KBTBD8Q8NFY9 601 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 WDR36Q8NI36 951 aaKnown RBP11.55□□□□□ -0.56
PTCH1-203ENST00000375274 POP5Q969H6 163 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms