RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 PPM1LQ5SGD2 360 aa18.35■□□□□ 0.53
RXRB-202ENST00000374685 SH2D4BQ5SQS7 431 aa18.35■□□□□ 0.53
RXRB-202ENST00000374685 ACBD5Q5T8D3 534 aaPredicted RBP18.35■□□□□ 0.53
RXRB-202ENST00000374685 C1orf146Q5VVC0 180 aa18.35■□□□□ 0.53
RXRB-202ENST00000374685 SEL1L3Q68CR1 1132 aa18.35■□□□□ 0.53
RXRB-202ENST00000374685 CARNMT1Q8N4J0 409 aa18.35■□□□□ 0.53
RXRB-202ENST00000374685 SNX31Q8N9S9 440 aa18.35■□□□□ 0.53
RXRB-202ENST00000374685 PTCD2Q8WV60 388 aaKnown RBP18.35■□□□□ 0.53
RXRB-202ENST00000374685 GPR78Q96P69 363 aa18.35■□□□□ 0.53
RXRB-202ENST00000374685 PPP1R2P1Q96PQ5 205 aa18.35■□□□□ 0.53
RXRB-202ENST00000374685 MRPL46Q9H2W6 279 aaKnown RBP18.35■□□□□ 0.53
RXRB-202ENST00000374685 MTRRQ9UBK8 725 aa18.35■□□□□ 0.53
RXRB-202ENST00000374685 UBA2Q9UBT2 640 aaPredicted RBP18.35■□□□□ 0.53
RXRB-202ENST00000374685 SLC4A7Q9Y6M7 1214 aa18.35■□□□□ 0.53
RXRB-202ENST00000374685 CCDC162PA2VCL2 907 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 STC2O76061 302 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 ZDHHC11BP0C7U3 371 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 CRABP2P29373 138 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 HADHAP40939 763 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 RPL14P50914 215 aaKnown RBP18.34■□□□□ 0.53
RXRB-202ENST00000374685 COPAP53621 1224 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 RING1Q06587 406 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 TWF1Q12792 350 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 DBN1Q16643 649 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 RNF219Q5W0B1 726 aaPredicted RBP18.34■□□□□ 0.53
RXRB-202ENST00000374685 ULK2Q8IYT8 1036 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 LPCAT1Q8NF37 534 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 FAM96AQ9H5X1 160 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.34■□□□□ 0.53
RXRB-202ENST00000374685 MBL2P11226 248 aaPredicted RBP18.34■□□□□ 0.53
RXRB-202ENST00000374685 ZNF177Q13360 481 aaPredicted RBP18.34■□□□□ 0.53
RXRB-202ENST00000374685 SEMA3AQ14563 771 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 FAM83EQ2M2I3 478 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 SLC8B1Q6J4K2 584 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 TRIM67Q6ZTA4 783 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 CALML6Q8TD86 181 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 VCX3BQ9H321 246 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 VCX3AQ9NNX9 186 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 DNAJC28Q9NX36 388 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 FAM50BQ9Y247 325 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 VWA7Q9Y334 891 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 YIPF1Q9Y548 306 aa18.34■□□□□ 0.53
RXRB-202ENST00000374685 COL4A4P53420 1690 aaPredicted RBP18.34■□□□□ 0.53
RXRB-202ENST00000374685 AIM2O14862 343 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 NVLO15381 856 aaKnown RBP18.33■□□□□ 0.53
RXRB-202ENST00000374685 CCL5P13501 91 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 HMGA1P17096 107 aaKnown RBP18.33■□□□□ 0.53
RXRB-202ENST00000374685 GSTT1P30711 240 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 APLP1P51693 650 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 DEFB103AP81534 67 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 SFSWAPQ12872 951 aaKnown RBP18.33■□□□□ 0.53
RXRB-202ENST00000374685 IKBKEQ14164 716 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 MUM1Q2TAK8 710 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 EPGNQ6UW88 154 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 FRMD7Q6ZUT3 714 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 CRIPAKQ8N1N5 446 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 TEX26Q8N6G2 289 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 DRC3Q9H069 523 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 OCEL1Q9H607 264 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 ARNT2Q9HBZ2 717 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.33■□□□□ 0.53
RXRB-202ENST00000374685 SLC7A8Q9UHI5 535 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 MID2Q9UJV3 735 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 AGO1Q9UL18 857 aaKnown RBP18.33■□□□□ 0.53
RXRB-202ENST00000374685 PLA2G4CQ9UP65 541 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 SPO11Q9Y5K1 396 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 WASF2Q9Y6W5 498 aa18.33■□□□□ 0.53
RXRB-202ENST00000374685 GPR39O43194 453 aa18.33■□□□□ 0.52
RXRB-202ENST00000374685 BAG2O95816 211 aa18.33■□□□□ 0.52
RXRB-202ENST00000374685 GLP2RO95838 553 aa18.33■□□□□ 0.52
RXRB-202ENST00000374685 APOA4P06727 396 aa18.33■□□□□ 0.52
RXRB-202ENST00000374685 BMP1P13497 986 aa18.33■□□□□ 0.52
RXRB-202ENST00000374685 MAPKAPK2P49137 400 aa18.33■□□□□ 0.52
RXRB-202ENST00000374685 YBEYP58557 167 aaPredicted RBP18.33■□□□□ 0.52
RXRB-202ENST00000374685 POU4F1Q01851 419 aa18.33■□□□□ 0.52
RXRB-202ENST00000374685 LSM12Q3MHD2 195 aaKnown RBP18.33■□□□□ 0.52
RXRB-202ENST00000374685 OR6Y1Q8NGX8 325 aa18.33■□□□□ 0.52
RXRB-202ENST00000374685 TMEM175Q9BSA9 504 aa18.33■□□□□ 0.52
RXRB-202ENST00000374685 IGSF5Q9NSI5 407 aa18.33■□□□□ 0.52
RXRB-202ENST00000374685 RAP2CQ9Y3L5 183 aa18.33■□□□□ 0.52
RXRB-202ENST00000374685 LMNAP02545 664 aaKnown RBP18.32■□□□□ 0.52
RXRB-202ENST00000374685 ATXN3P54252 364 aaPredicted RBP18.32■□□□□ 0.52
RXRB-202ENST00000374685 SMAD3P84022 425 aaKnown RBP18.32■□□□□ 0.52
RXRB-202ENST00000374685 FSCBQ5H9T9 825 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 TCHHL1Q5QJ38 904 aaPredicted RBP18.32■□□□□ 0.52
RXRB-202ENST00000374685 TXNDC8Q6A555 127 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 TMEM207Q6UWW9 146 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 RIPOR1Q6ZS17 1223 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 LSMEM2Q8N112 164 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 ARHGAP24Q8N264 748 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 OR4K2Q8NGD2 314 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 ZNF461Q8TAF7 563 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 LENG8Q96PV6 779 aaPredicted RBP18.32■□□□□ 0.52
RXRB-202ENST00000374685 TTC1Q99614 292 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 CWH43Q9H720 699 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 MRM3Q9HC36 420 aaKnown RBP18.32■□□□□ 0.52
RXRB-202ENST00000374685 NMRK1Q9NWW6 199 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 PDP2Q9P2J9 529 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 ZNF232Q9UNY5 417 aa18.32■□□□□ 0.52
RXRB-202ENST00000374685 TMEM114B3SHH9 223 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms