RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ZNF470Q6ECI4 717 aa10.28□□□□□ -0.76
CD28-202ENST00000374481 PROSER1Q86XN7 944 aa10.28□□□□□ -0.76
CD28-202ENST00000374481 UBA3Q8TBC4 463 aa10.28□□□□□ -0.76
CD28-202ENST00000374481 FRMD6Q96NE9 622 aa10.28□□□□□ -0.76
CD28-202ENST00000374481 GTPBP2Q9BX10 602 aaKnown RBP10.28□□□□□ -0.76
CD28-202ENST00000374481 IKZF4Q9H2S9 585 aa10.28□□□□□ -0.76
CD28-202ENST00000374481 SLC27A5Q9Y2P5 690 aa10.28□□□□□ -0.76
CD28-202ENST00000374481 FAM92AA1XBS5 289 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 RPLP0P05388 317 aaKnown RBP10.27□□□□□ -0.76
CD28-202ENST00000374481 CSH1P0DML2 217 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 CSH2P0DML3 217 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 RPS3P23396 243 aaKnown RBP eCLIP10.27□□□□□ -0.76
CD28-202ENST00000374481 ELK4P28324 431 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 ETV3P41162 512 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 HARS2P49590 506 aaKnown RBP10.27□□□□□ -0.76
CD28-202ENST00000374481 GDI2P50395 445 aaKnown RBP10.27□□□□□ -0.76
CD28-202ENST00000374481 EFR3AQ14156 821 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 STARD3Q14849 445 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 NPTX1Q15818 432 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 LCN1P1Q5VSP4 162 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 DESI1Q6ICB0 168 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 GALNT5Q7Z7M9 940 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 KIF18BQ86Y91 864 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 FNDC5Q8NAU1 212 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 UXS1Q8NBZ7 420 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 KREMEN1Q96MU8 473 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 RTFDC1Q9BY42 306 aaPredicted RBP10.27□□□□□ -0.76
CD28-202ENST00000374481 ADAMTS10Q9H324 1103 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 SOX17Q9H6I2 414 aaPredicted RBP10.27□□□□□ -0.76
CD28-202ENST00000374481 KCNK13Q9HB14 408 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 GPRC5CQ9NQ84 441 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 INTS10Q9NVR2 710 aaKnown RBP10.27□□□□□ -0.76
CD28-202ENST00000374481 MAGEL2Q9UJ55 1249 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 UGT2A1Q9Y4X1 527 aa10.27□□□□□ -0.76
CD28-202ENST00000374481 POU4F1Q01851 419 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 C11orf88Q6PI97 169 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 KCNT2Q6UVM3 1135 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 HTR3CQ8WXA8 447 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 MUS81Q96NY9 551 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 REEP1Q9H902 201 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 THG1LQ9NWX6 298 aaKnown RBP10.27□□□□□ -0.77
CD28-202ENST00000374481 TSR3Q9UJK0 312 aaKnown RBP10.27□□□□□ -0.77
CD28-202ENST00000374481 TRIM64A6NGJ6 449 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 TRIM64BA6NI03 449 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 UGT2B11O75310 529 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 HMGCRP04035 888 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 TPI1P60174 286 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 ELP6Q0PNE2 266 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 PWP1Q13610 501 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 SH3BP5LQ7L8J4 393 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 OTOP3Q7RTS5 596 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 AADATQ8N5Z0 425 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 TRPV3Q8NET8 790 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 ZFP90Q8TF47 636 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 C2orf49Q9BVC5 232 aaPredicted RBP10.27□□□□□ -0.77
CD28-202ENST00000374481 MUC13Q9H3R2 512 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 GPBP1L1Q9HC44 474 aaPredicted RBP10.27□□□□□ -0.77
CD28-202ENST00000374481 SFMBT1Q9UHJ3 866 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 EIF3LQ9Y262 564 aaKnown RBP10.27□□□□□ -0.77
CD28-202ENST00000374481 DISP2A7MBM2 1401 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 GAKO14976 1311 aa10.27□□□□□ -0.77
CD28-202ENST00000374481 MYL12BO14950 172 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 XYLBO75191 536 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 BCAS1O75363 584 aaPredicted RBP10.26□□□□□ -0.77
CD28-202ENST00000374481 HGFP14210 728 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 NCK1P16333 377 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 CYP2F1P24903 491 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 DEFA5Q01523 94 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 LIPEQ05469 1076 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 VPS26BQ4G0F5 336 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 HSD17B12Q53GQ0 312 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 TRMT10BQ6PF06 316 aaKnown RBP10.26□□□□□ -0.77
CD28-202ENST00000374481 NATD1Q8N6N6 113 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 POF1BQ8WVV4 589 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 ACDQ96AP0 544 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 NAA50Q9GZZ1 169 aaKnown RBP10.26□□□□□ -0.77
CD28-202ENST00000374481 RACGAP1Q9H0H5 632 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 ALG2Q9H553 416 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 RIOX1Q9H6W3 641 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 FAM105AQ9NUU6 356 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 POLG2Q9UHN1 485 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 EDARQ9UNE0 448 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 GRIP1Q9Y3R0 1128 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 MSI1O43347 362 aaKnown RBP10.26□□□□□ -0.77
CD28-202ENST00000374481 NOMO3P69849 1222 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 SNAPC1Q16533 368 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 PXDC1Q5TGL8 231 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 CDHR3Q6ZTQ4 885 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 DSG4Q86SJ6 1040 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 GALNT11Q8NCW6 608 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 ADAMTS16Q8TE57 1224 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 OTUB1Q96FW1 271 aaPredicted RBP10.26□□□□□ -0.77
CD28-202ENST00000374481 ZNF285Q96NJ3 590 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 SLC29A1Q99808 456 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 RAVER2Q9HCJ3 691 aaKnown RBP10.26□□□□□ -0.77
CD28-202ENST00000374481 KCNN3Q9UGI6 736 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 GSTK1Q9Y2Q3 226 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 ROBO3Q96MS0 1386 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 KAT6AQ92794 2004 aa10.26□□□□□ -0.77
CD28-202ENST00000374481 KDM4BO94953 1096 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms