RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 SPNS2Q8IVW8 549 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 CENPIQ92674 756 aaPredicted RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 ZNF558Q96NG5 402 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 OSBPL2Q9H1P3 480 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 TNKS2Q9H2K2 1166 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 LMCD1Q9NZU5 365 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 NDUFAF1Q9Y375 327 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 RAI2Q9Y5P3 530 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 TMEM114B3SHH9 223 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 STX16-NPEPL1H3BU86 382 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 FGF1P05230 155 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 LPOP22079 712 aaPredicted RBP13.59□□□□□ -0.23
CLIC4-201ENST00000374379 PSME3P61289 254 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 KRT72Q14CN4 511 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 MS4A13Q5J8X5 152 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 SWT1Q5T5J6 900 aaKnown RBP13.59□□□□□ -0.23
CLIC4-201ENST00000374379 MBLAC2Q68D91 279 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 RNF19BQ6ZMZ0 732 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 LRRC49Q8IUZ0 686 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 SPDYE1Q8NFV5 336 aaPredicted RBP13.59□□□□□ -0.23
CLIC4-201ENST00000374379 LINGO1Q96FE5 620 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 ZDHHC6Q9H6R6 413 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 ZNF212Q9UDV6 495 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 SORCS3Q9UPU3 1222 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 CCDC162PA2VCL2 907 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 ZNF839A8K0R7 811 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 DLX3O60479 287 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 SNAP91O60641 907 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 ESRRBO95718 433 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 EOMESO95936 686 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 FGF3P11487 239 aaPredicted RBP13.59□□□□□ -0.23
CLIC4-201ENST00000374379 HLA-DPA1P20036 260 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 CD68P34810 354 aaPredicted RBP13.59□□□□□ -0.23
CLIC4-201ENST00000374379 OTUD3Q5T2D3 398 aaPredicted RBP13.59□□□□□ -0.23
CLIC4-201ENST00000374379 ZYG11AQ6WRX3 759 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 LINC01465Q8N7H1 131 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 NAT16Q8N8M0 369 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 ST13P5Q8NFI4 369 aaPredicted RBP13.59□□□□□ -0.23
CLIC4-201ENST00000374379 SLC7A6OSQ96CW6 309 aaPredicted RBP13.59□□□□□ -0.23
CLIC4-201ENST00000374379 SMOC2Q9H3U7 446 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 SIRPGQ9P1W8 387 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 WARS2Q9UGM6 360 aaKnown RBP13.59□□□□□ -0.23
CLIC4-201ENST00000374379 SRRDQ9UH36 339 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 ZDHHC2Q9UIJ5 367 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 TLR6Q9Y2C9 796 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 ACTL7AQ9Y615 435 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 NPEPPSL1A6NEC2 478 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 CCNG1P51959 295 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 ST8SIA6P61647 398 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 TRIP4Q15650 581 aaPredicted RBP13.59□□□□□ -0.23
CLIC4-201ENST00000374379 UGT3A1Q6NUS8 523 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 DSELQ8IZU8 1212 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 JADE3Q92613 823 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 ZFP14Q9HCL3 533 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 TMEM161AQ9NX61 479 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 CDH22Q9UJ99 828 aa13.59□□□□□ -0.23
CLIC4-201ENST00000374379 PNMA8BQ9ULN7 279 aaPredicted RBP13.59□□□□□ -0.23
CLIC4-201ENST00000374379 hCG_2014768A0A024R1R8 64 aa13.58□□□□□ -0.23
CLIC4-201ENST00000374379 AURKAO14965 403 aa13.58□□□□□ -0.23
CLIC4-201ENST00000374379 GRIA3P42263 894 aa13.58□□□□□ -0.23
CLIC4-201ENST00000374379 ATP6AP1LQ52LC2 224 aa13.58□□□□□ -0.23
CLIC4-201ENST00000374379 FBXO27Q8NI29 283 aa13.58□□□□□ -0.23
CLIC4-201ENST00000374379 MRPL17Q9NRX2 175 aaKnown RBP13.58□□□□□ -0.23
CLIC4-201ENST00000374379 THEGQ9P2T0 379 aa13.58□□□□□ -0.23
CLIC4-201ENST00000374379 CIDEBQ9UHD4 219 aa13.58□□□□□ -0.23
CLIC4-201ENST00000374379 FKBPLQ9UIM3 349 aa13.58□□□□□ -0.23
CLIC4-201ENST00000374379 GJD2Q9UKL4 321 aa13.58□□□□□ -0.23
CLIC4-201ENST00000374379 SLC38A8A6NNN8 435 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 GABRDO14764 452 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 ZNF7P17097 686 aaPredicted RBP13.58□□□□□ -0.24
CLIC4-201ENST00000374379 PPP3CCP48454 512 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 GSCP56915 257 aaPredicted RBP13.58□□□□□ -0.24
CLIC4-201ENST00000374379 ZBTB49Q6ZSB9 765 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 FRMD7Q6ZUT3 714 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 TRPV1Q8NER1 839 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 IGSF8Q969P0 613 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 ADNPQ9H2P0 1102 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 NDST3O95803 873 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 ZNF23P17027 643 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 SLC7A2P52569 658 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 HTRA3P83110 453 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 SIRPB2Q5JXA9 342 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 TBCELQ5QJ74 424 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.58□□□□□ -0.247e-10■■■■■ 139.2
CLIC4-201ENST00000374379 SH3KBP1Q96B97 665 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 CDK5RAP1Q96SZ6 601 aaKnown RBP13.58□□□□□ -0.24
CLIC4-201ENST00000374379 TBCDQ9BTW9 1192 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 MMADHCQ9H3L0 296 aaPredicted RBP13.58□□□□□ -0.24
CLIC4-201ENST00000374379 KLQ9UEF7 1012 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 FAF1Q9UNN5 650 aaPredicted RBP13.58□□□□□ -0.24
CLIC4-201ENST00000374379 A0A0U1RQS6 177 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 SERPIND1P05546 499 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 HCAR3P49019 387 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 PRKAA2P54646 552 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 KRT33BQ14525 404 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 TSNQ15631 228 aaKnown RBP13.58□□□□□ -0.24
CLIC4-201ENST00000374379 TTLL9Q3SXZ7 439 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 DHDDSQ86SQ9 333 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 ACVR1CQ8NER5 493 aa13.58□□□□□ -0.24
CLIC4-201ENST00000374379 ARNTL2Q8WYA1 636 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms