RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ROPN1LQ96C74 230 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 FCRL3Q96P31 734 aaPredicted RBP12.95□□□□□ -0.34
PRPF4-201ENST00000374198 BCL7BQ9BQE9 202 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 ADPGKQ9BRR6 497 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 CNPY3Q9BT09 278 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 STYXL1Q9Y6J8 313 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 CLRN2A0PK11 232 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 EVPLLA8MZ36 301 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 NDUFS2O75306 463 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 MFN2O95140 757 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 SEC24AO95486 1093 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 CD19P15391 556 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 SPNP16150 400 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 BNIP2Q12982 314 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 C15orf59Q2T9L4 293 aaPredicted RBP12.95□□□□□ -0.34
PRPF4-201ENST00000374198 CST9Q5W186 159 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 ZCCHC8Q6NZY4 707 aaKnown RBP12.95□□□□□ -0.34
PRPF4-201ENST00000374198 HACE1Q8IYU2 909 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 CCNYL1Q8N7R7 359 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 BEND7Q8N7W2 519 aaPredicted RBP12.95□□□□□ -0.34
PRPF4-201ENST00000374198 OR13J1Q8NGT2 312 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 KLRG1Q96E93 195 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 MCRS1Q96EZ8 462 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 ZNF560Q96MR9 790 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 AGAP2Q99490 1192 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 ALOXE3Q9BYJ1 711 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 NIF3L1Q9GZT8 377 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 SLC38A10Q9HBR0 1119 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 NECTIN3Q9NQS3 549 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 ZNF221Q9UK13 617 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 MRPL11Q9Y3B7 192 aaKnown RBP12.95□□□□□ -0.34
PRPF4-201ENST00000374198 HSD17B1P14061 328 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 IL7RP16871 459 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 GPD1P21695 349 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 CRKP46108 304 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 GLRBP48167 497 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 MYL6P60660 151 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 GALK2Q01415 458 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 PIGFQ07326 219 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 C19orf57Q0VDD7 668 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 CDK10Q15131 360 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 CYP51A1Q16850 503 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 CDO1Q16878 200 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 FAM102AQ5T9C2 384 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-201ENST00000374198 DESI1Q6ICB0 168 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.94□□□□□ -0.34
PRPF4-201ENST00000374198 ESX1Q8N693 406 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 NATD1Q8N6N6 113 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 DNAJC5GQ8N7S2 189 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 ACVR1CQ8NER5 493 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 STYXQ8WUJ0 223 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 ZBTB45Q96K62 511 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-201ENST00000374198 SCYL1Q96KG9 808 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 PRMT6Q96LA8 375 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-201ENST00000374198 DHRS9Q9BPW9 319 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 BTBD2Q9BX70 525 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 ABCD2Q9UBJ2 740 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 PTPRFP10586 1907 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 CDK2AP1O14519 115 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 ARPC2O15144 300 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 DLX3O60479 287 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 DAB1O75553 588 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 LDLRP01130 860 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 CD68P34810 354 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-201ENST00000374198 GRK3P35626 688 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 GPD2P43304 727 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 CLCNKBP51801 687 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 GBE1Q04446 702 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 GRM1Q13255 1194 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 PPP1R3AQ16821 1122 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 APOBEC3FQ8IUX4 373 aaKnown RBP12.94□□□□□ -0.34
PRPF4-201ENST00000374198 ELMOD2Q8IZ81 293 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 SLC43A3Q8NBI5 491 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 LSM14AQ8ND56 463 aaKnown RBP12.94□□□□□ -0.34
PRPF4-201ENST00000374198 SIMC1Q8NDZ2 872 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 OR9I1Q8NGQ6 314 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 DYNC2LI1Q8TCX1 351 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 GLMNQ92990 594 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 CDCA5Q96FF9 252 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 LRCH3Q96II8 777 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 C1QTNF1Q9BXJ1 281 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 IRF2BPLQ9H1B7 796 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 DSN1Q9H410 356 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 RAVER2Q9HCJ3 691 aaKnown RBP12.94□□□□□ -0.34
PRPF4-201ENST00000374198 CCDC177Q9NQR7 707 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-201ENST00000374198 MAU2Q9Y6X3 613 aa12.94□□□□□ -0.34
PRPF4-201ENST00000374198 GDF11O95390 407 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 PDGFRAP16234 1089 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 SEPHS1P49903 392 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 GABARAPL2P60520 117 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 TNFAIP2Q03169 654 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 IMPG1Q17R60 797 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 ZNF181Q2M3W8 571 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 TKFCQ3LXA3 575 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 SNAP47Q5SQN1 464 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 PRAMEF18Q5VWM3 479 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 STEAP3Q658P3 488 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 HEATR6Q6AI08 1181 aaKnown RBP12.93□□□□□ -0.34
PRPF4-201ENST00000374198 TRNP1Q6NT89 227 aa12.93□□□□□ -0.34
PRPF4-201ENST00000374198 TAF2Q6P1X5 1199 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms