RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 CES3Q6UWW8 571 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 ARHGAP36Q6ZRI8 547 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 TMC7Q7Z402 723 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 TFAP2DQ7Z6R9 452 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 CMC1Q7Z7K0 106 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 SCUBE1Q8IWY4 988 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 CENPLQ8N0S6 344 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 CBARPQ8N350 705 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 LRRN4Q8WUT4 740 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 OTUB2Q96DC9 234 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 TMA16Q96EY4 203 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 CDKN2AIPNLQ96HQ2 116 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 LRCH3Q96II8 777 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 TUBGCP5Q96RT8 1024 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 C1QTNF3Q9BXJ4 246 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 TDRD1Q9BXT4 1180 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 EMILIN2Q9BXX0 1053 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 CADM1Q9BY67 442 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 DERL2Q9GZP9 239 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 CCSER2Q9H7U1 834 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 EFCAB1Q9HAE3 211 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 RC3H2Q9HBD1 1191 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 RAD18Q9NS91 495 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 TMEM39AQ9NV64 488 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 AGO1Q9UL18 857 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 LRRC42Q9Y546 428 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 YIPF1Q9Y548 306 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 TNPO3Q9Y5L0 923 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 NR2E3Q9Y5X4 410 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 ZFP37Q9Y6Q3 630 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 MYO18AQ92614 2054 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 COL4A6Q14031 1691 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 F8W810 466 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 STX16-NPEPL1H3BU86 382 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 GFRA2O00451 464 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 STX16O14662 325 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 KIAA0355O15063 1070 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 VPS26AO75436 327 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 NDUFS3O75489 264 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 WISP3O95389 354 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 CBX6O95503 412 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 MLYCDO95822 493 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 TIMP1P01033 207 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 CYBBP04839 570 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 ADH1AP07327 375 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 TCF3P15923 654 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 CORO1AP31146 461 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 HOXA9P31269 272 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 HMGCLP35914 325 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 GPR15P49685 360 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 RABGGTBP53611 331 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 TAS2R39P59534 338 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 HERVK_113P63132 956 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 MXRA7P84157 204 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 CAP1Q01518 475 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 DSC2Q02487 901 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 TLE2Q04725 743 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 BTKQ06187 659 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 RAD51Q06609 339 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 CTBP1Q13363 440 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 ARL13AQ5H913 290 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 TECRLQ5HYJ1 363 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 COQ5Q5HYK3 327 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 SPOUT1Q5T280 376 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 NADSYN1Q6IA69 706 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 PDE12Q6L8Q7 609 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 ZFP1Q6P2D0 407 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 C16orf46Q6P387 395 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 RSPO2Q6UXX9 243 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 DNAJB7Q7Z6W7 309 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 CTU1Q7Z7A3 348 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 CLYBLQ8N0X4 340 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 GPATCH11Q8N954 259 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 DLG3Q92796 817 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 KCNJ9Q92806 393 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 HDAC10Q969S8 669 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 MAGEB10Q96LZ2 347 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 APOL2Q9BQE5 337 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 ERVK-6Q9BXR3 956 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 CEP44Q9C0F1 390 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 ARL8BQ9NVJ2 186 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 KIAA1522Q9P206 1035 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 DNMT3BQ9UBC3 853 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 GGT7Q9UJ14 662 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 PKP3Q9Y446 797 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 GREB1Q4ZG55 1949 aa8.73□□□□□ -1.01
SNRNP40-202ENST00000373720 CHD5Q8TDI0 1954 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 E2F8A0AVK6 867 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 BBIP1A8MTZ0 92 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 H0Y626 953 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 DLX3O60479 287 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 DIAPH2O60879 1101 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 LILRB3O75022 631 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 ARHGEF15O94989 841 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 ANP32DO95626 131 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 TBX18O95935 607 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 CHEK2O96017 543 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 NPPAP01160 153 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 F11P03951 625 aa8.72□□□□□ -1.01
SNRNP40-202ENST00000373720 CCDC166P0CW27 439 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms