RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 FKBP9P1Q75LS8 142 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 PRRT2Q7Z6L0 340 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-203ENST00000372232 ZCCHC9Q8N567 271 aaKnown RBP8.89□□□□□ -0.99
ATG4A-203ENST00000372232 PAF1Q8N7H5 531 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 MZB1Q8WU39 189 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 CPA5Q8WXQ8 436 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 CGRRF1Q99675 332 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 C17orf62Q9BQA9 187 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 SPATA9Q9BWV2 254 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 R3HDMLQ9H3Y0 253 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 DPEP3Q9H4B8 488 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 ATP13A3Q9H7F0 1226 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 ALG13Q9NP73 1137 aaKnown RBP8.89□□□□□ -0.99
ATG4A-203ENST00000372232 ADARB2Q9NS39 739 aaKnown RBP8.89□□□□□ -0.99
ATG4A-203ENST00000372232 RIMKLBQ9ULI2 386 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 PCDHB14Q9Y5E9 798 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 LOC285556D6RIA3 1793 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 RNASEH2AO75792 299 aaKnown RBP8.89□□□□□ -0.99
ATG4A-203ENST00000372232 CNMDO75829 334 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 EPN2O95208 641 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 KRT8P05787 483 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 NELFEP18615 380 aaKnown RBP8.89□□□□□ -0.99
ATG4A-203ENST00000372232 ATF6P18850 670 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 RRM1P23921 792 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 CSTF2P33240 577 aaKnown RBP eCLIP8.89□□□□□ -0.99
ATG4A-203ENST00000372232 ETV1P50549 477 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 CLCNKBP51801 687 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 OCA2Q04671 838 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 TRAP1Q12931 704 aaKnown RBP8.89□□□□□ -0.99
ATG4A-203ENST00000372232 HIF1AQ16665 826 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 MGAT5BQ3V5L5 792 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 YOD1Q5VVQ6 348 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-203ENST00000372232 IQSEC1Q6DN90 963 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 ZPBP2Q6X784 338 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 TRIM72Q6ZMU5 477 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 ZBTB46Q86UZ6 589 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 SLC22A16Q86VW1 577 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 LACC1Q8IV20 430 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 COLGALT2Q8IYK4 626 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 DEFB107AQ8IZN7 70 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 TCAIMQ8N3R3 496 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 OR5B17Q8NGF7 314 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 OR5H6Q8NGV6 325 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 OR6P1Q8NGX9 317 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 SH3KBP1Q96B97 665 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 SCYL1Q96KG9 808 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 MIR1-1HGQ9H1L0 117 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 TIGARQ9NQ88 270 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 ANAPC7Q9UJX3 599 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 PSME2Q9UL46 239 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 WDR90Q96KV7 1748 aa8.89□□□□□ -0.99
ATG4A-203ENST00000372232 FAM86C2PA6NEL3 165 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 PCP4L1A6NKN8 68 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 FSCN2O14926 492 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 CLDN3O15551 220 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 MAN1A2O60476 641 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 MSCO60682 206 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 ARIH2O95376 493 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 MAPK4P31152 587 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 NSFP46459 744 aaKnown RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 EFNA5P52803 228 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 POLR2GP62487 172 aaKnown RBP eCLIP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 GPLD1P80108 840 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 RHAGQ02094 409 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 IKBKEQ14164 716 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 GALNT3Q14435 633 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 RSBN1Q5VWQ0 802 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 TMEM270Q6UE05 265 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 KIAA0408Q6ZU52 694 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 DLG3Q92796 817 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 TIFAQ96CG3 184 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 C12orf65Q9H3J6 166 aaKnown RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 PKD2L2Q9NZM6 624 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 NXF1Q9UBU9 619 aaKnown RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 CNTN6Q9UQ52 1028 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 MYH9P35579 1960 aaKnown RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 A0A1W2PQ72 361 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 FAM25AB3EWG3 89 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 FAM25CB3EWG5 89 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 FAM25GB3EWG6 89 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 CXCL11O14625 94 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 RNGTTO60942 597 aaKnown RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 TOM1L1O75674 476 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 SLC25A27O95847 323 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 OLFM2O95897 454 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 PGK2P07205 417 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 SNRPAP09012 282 aaKnown RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 DBTP11182 482 aaKnown RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 KRT20P35900 424 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 LEPRP48357 1165 aaKnown RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 CENPAP49450 140 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 HK2P52789 917 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 AQP5P55064 265 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 MRPS22P82650 360 aaKnown RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 TMPRSS15P98073 1019 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 SQLEQ14534 574 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 MLC1Q15049 377 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 AASDHQ4L235 1098 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 C2CD6Q53TS8 623 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms