RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 ELAVL2Q12926 359 aaKnown RBP20.64■□□□□ 0.89
VEGFA-204ENST00000372064 BFSP2Q13515 415 aa20.64■□□□□ 0.89
VEGFA-204ENST00000372064 PIGGQ5H8A4 983 aa20.64■□□□□ 0.89
VEGFA-204ENST00000372064 OR7D4Q8NG98 312 aa20.64■□□□□ 0.89
VEGFA-204ENST00000372064 SEPT8Q92599 483 aa20.64■□□□□ 0.89
VEGFA-204ENST00000372064 MARK4Q96L34 752 aa20.64■□□□□ 0.89
VEGFA-204ENST00000372064 RETREG1Q9H6L5 497 aa20.64■□□□□ 0.89
VEGFA-204ENST00000372064 ZDHHC7Q9NXF8 308 aa20.64■□□□□ 0.89
VEGFA-204ENST00000372064 CRYL1Q9Y2S2 319 aa20.64■□□□□ 0.89
VEGFA-204ENST00000372064 CHD5Q8TDI0 1954 aa20.64■□□□□ 0.89
VEGFA-204ENST00000372064 RPL17P18621 184 aaKnown RBP20.63■□□□□ 0.89
VEGFA-204ENST00000372064 BNC2Q6ZN30 1099 aaPredicted RBP20.63■□□□□ 0.89
VEGFA-204ENST00000372064 RPS27LQ71UM5 84 aaKnown RBP20.63■□□□□ 0.89
VEGFA-204ENST00000372064 ISCA2Q86U28 154 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 CUZD1Q86UP6 607 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 FAM126BQ8IXS8 530 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 BRSK1Q8TDC3 778 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 L3HYPDHQ96EM0 354 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 DNAJC1Q96KC8 554 aaKnown RBP20.63■□□□□ 0.89
VEGFA-204ENST00000372064 CAPNS2Q96L46 248 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 GSTO2Q9H4Y5 243 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 PHF24Q9UPV7 400 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 GOT2P00505 430 aaKnown RBP20.63■□□□□ 0.89
VEGFA-204ENST00000372064 IMPDH1P20839 514 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 HOXD9P28356 352 aaPredicted RBP20.63■□□□□ 0.89
VEGFA-204ENST00000372064 NFKB2Q00653 900 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 ZNF423Q2M1K9 1284 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 GPR158Q5T848 1215 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 TMEM154Q6P9G4 183 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 PIM3Q86V86 326 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 FBXO22Q8NEZ5 403 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 TRIB3Q96RU7 358 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 CREBZFQ9NS37 354 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 MRGBPQ9NV56 204 aa20.63■□□□□ 0.89
VEGFA-204ENST00000372064 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.62■□□□□ 0.89
VEGFA-204ENST00000372064 DPPA5A6NC42 116 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 TCAF2A6NFQ2 919 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 ACSL4O60488 711 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 GJB5O95377 273 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 GLP2RO95838 553 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 HOXB8P17481 243 aaPredicted RBP20.62■□□□□ 0.89
VEGFA-204ENST00000372064 SUOXP51687 545 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 INHBCP55103 352 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 TIAL1Q01085 375 aaKnown RBP eCLIP20.62■□□□□ 0.893e-10■□□□□ 9.2
VEGFA-204ENST00000372064 ZNF549Q6P9A3 640 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 CRIPAKQ8N1N5 446 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 AFAP1L2Q8N4X5 818 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 NR1H4Q96RI1 486 aaPredicted RBP20.62■□□□□ 0.89
VEGFA-204ENST00000372064 MGME1Q9BQP7 344 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 TRMOQ9BU70 441 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 CASQ2O14958 399 aaPredicted RBP20.62■□□□□ 0.89
VEGFA-204ENST00000372064 RPP40O75818 363 aaKnown RBP20.62■□□□□ 0.89
VEGFA-204ENST00000372064 LINGO3P0C6S8 592 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 ATP5C1P36542 298 aaKnown RBP20.62■□□□□ 0.89
VEGFA-204ENST00000372064 PDSS2Q86YH6 399 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 OR13C4Q8NGS5 318 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 CDK5RAP1Q96SZ6 601 aaKnown RBP20.62■□□□□ 0.89
VEGFA-204ENST00000372064 MAGEH1Q9H213 219 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 EFCAB1Q9HAE3 211 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 DNMT3LQ9UJW3 386 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 FIS1Q9Y3D6 152 aa20.62■□□□□ 0.89
VEGFA-204ENST00000372064 ZFP37Q9Y6Q3 630 aaPredicted RBP20.62■□□□□ 0.89
VEGFA-204ENST00000372064 CD3EAPO15446 510 aaKnown RBP20.61■□□□□ 0.89
VEGFA-204ENST00000372064 RAG1P15918 1043 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 KCNC1P48547 511 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 RPS24P62847 133 aaKnown RBP20.61■□□□□ 0.89
VEGFA-204ENST00000372064 APLFQ8IW19 511 aaPredicted RBP20.61■□□□□ 0.89
VEGFA-204ENST00000372064 PHF21BQ96EK2 531 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 CDRT15Q96T59 188 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 NACA2Q9H009 215 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 VCX3BQ9H321 246 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 ALG9Q9H6U8 611 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 POPDC3Q9HBV1 291 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 THOP1P52888 689 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 C1QTNF8P60827 252 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 XIAPP98170 497 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 GNA12Q03113 381 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 IL31Q6EBC2 164 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 MRNIPQ6NTE8 343 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 ZNF512Q96ME7 567 aaPredicted RBP20.61■□□□□ 0.89
VEGFA-204ENST00000372064 TMEM175Q9BSA9 504 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 SPON2Q9BUD6 331 aa20.61■□□□□ 0.89
VEGFA-204ENST00000372064 CCDC162PA2VCL2 907 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 SLC4A1P02730 911 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 SERPINF2P08697 491 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 SEMA3AQ14563 771 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 ZNF678Q5SXM1 525 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 HIPK4Q8NE63 616 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 SPDL1Q96EA4 605 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 SCLYQ96I15 445 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 WDR41Q9HAD4 459 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 POLR3BQ9NW08 1133 aaPredicted RBP20.6■□□□□ 0.89
VEGFA-204ENST00000372064 PACSIN3Q9UKS6 424 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 MAGEA13PA6NCF6 341 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 UBFD1O14562 309 aaKnown RBP20.6■□□□□ 0.89
VEGFA-204ENST00000372064 SKAP2O75563 359 aaPredicted RBP20.6■□□□□ 0.89
VEGFA-204ENST00000372064 CD1DP15813 335 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 OGNP20774 298 aaKnown RBP20.6■□□□□ 0.89
VEGFA-204ENST00000372064 PTERQ96BW5 349 aa20.6■□□□□ 0.89
VEGFA-204ENST00000372064 NSMCE3Q96MG7 304 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms