RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 LGR5O75473 907 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 SLC22A3O75751 556 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 TMEM63AO94886 807 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 CCDC159P0C7I6 412 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 PRDX6P30041 224 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 PSMD7P51665 324 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 TRIP4Q15650 581 aaPredicted RBP11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 RFX4Q33E94 735 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 TIMM50Q3ZCQ8 353 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 FNDC3BQ53EP0 1204 aaKnown RBP11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 SMYD5Q6GMV2 418 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 SPATA19Q7Z5L4 167 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 NAT8LQ8N9F0 302 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 ZC4H2Q9NQZ6 224 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 TMPRSS4Q9NRS4 437 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 PNPLA3Q9NST1 481 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 FBXW11Q9UKB1 542 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 CORO2BQ9UQ03 480 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 MYH2Q9UKX2 1941 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 PRR23D1E9PI22 279 aaPredicted RBP11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 FFAR3O14843 346 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 GPR42O15529 346 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 CAPN15O75808 1086 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 PRR23D2P0DMB1 279 aaPredicted RBP11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 FGFR3P22607 806 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 HOXD13P35453 343 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 IFNGR2P38484 337 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 RFX3P48380 749 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 CLCNKBP51801 687 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 GDF10P55107 478 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 RPS7P62081 194 aaKnown RBP11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 TMEM110Q86TL2 294 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 TAC4Q86UU9 113 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 CRYBG2Q8N1P7 616 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 NXNL1Q96CM4 212 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 SLC39A8Q9C0K1 460 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 DPEP3Q9H4B8 488 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 ZFP14Q9HCL3 533 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 PSME2Q9UL46 239 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 FZD10Q9ULW2 581 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 SLC12A4Q9UP95 1085 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 TDRKHQ9Y2W6 561 aaKnown RBP11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 ZNF536O15090 1300 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 SYN3O14994 580 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 CREB1P16220 341 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 PFKPQ01813 784 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 C16orf72Q14CZ0 275 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 TARBP2Q15633 366 aaKnown RBP11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 FSTL4Q6MZW2 842 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 ZNF605Q86T29 641 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 C11orf74Q86VG3 221 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 HEXDCQ8WVB3 486 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 GMIPQ9P107 970 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 MYBPHLA2RUH7 354 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 ACADMP11310 421 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 HPGDP15428 266 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 NDST2P52849 883 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 DCTN2Q13561 401 aaKnown RBP11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 TCEAL1Q15170 157 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 PHKG1Q16816 387 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 DGUOKQ16854 277 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 PPM1JQ5JR12 505 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 GCNT7Q6ZNI0 430 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 PYROXD2Q8N2H3 581 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 RTL3Q8N8U3 475 aaKnown RBP11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 OR4K2Q8NGD2 314 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 TIFAQ96CG3 184 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 CCDC3Q9BQI4 270 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 GATA5Q9BWX5 397 aaPredicted RBP11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 MAGEH1Q9H213 219 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 S100A14Q9HCY8 104 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 AP4B1Q9Y6B7 739 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 H3BN98 237 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 LIN7AO14910 233 aaPredicted RBP11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 PARNO95453 639 aaKnown RBP11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 PCSK2P16519 638 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 PPIBP23284 216 aaKnown RBP11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 MAPKAPK2P49137 400 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 GLUD2P49448 558 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 SPRYD7Q5W111 196 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 TBC1D21Q8IYX1 336 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 PGAM4Q8N0Y7 254 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 GRIN3AQ8TCU5 1115 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 RHOBTB2Q9BYZ6 727 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 CAPN10Q9HC96 672 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 KIAA1522Q9P206 1035 aaPredicted RBP11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 COMMD3-BMI1R4GMX3 469 aa11.87□□□□□ -0.51
DEPDC1-201ENST00000370966 A0A0J9YYE9 177 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 PEX10O60683 326 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 LINC00032P0C843 101 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 ACAP2Q15057 778 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 CPSF6Q16630 551 aaKnown RBP eCLIP11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 FGD3Q5JSP0 725 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 BROXQ5VW32 411 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 ZDHHC20Q5W0Z9 365 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 SCIMPQ6UWF3 145 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 PROSER1Q86XN7 944 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 MTERF3Q96E29 417 aa11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 MRPS26Q9BYN8 205 aaKnown RBP11.86□□□□□ -0.51
DEPDC1-201ENST00000370966 PALMDQ9NP74 551 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms