RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 FGGP02679 453 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 KRT7P08729 469 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 RALAP11233 206 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 COL6A2P12110 1019 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 KRT10P13645 584 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 RDXP35241 583 aaKnown RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 CCR2P41597 374 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 NRIP1P48552 1158 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 FAM193AP78312 1265 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 C2orf54Q08AI8 447 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 EFEMP1Q12805 493 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 KCNAB2Q13303 367 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 LAPTM5Q13571 262 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 KCNC3Q14003 757 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 VEPH1Q14D04 833 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 DUSP6Q16828 381 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 KCTD19Q17RG1 926 aaPredicted RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 FAM72AQ5TYM5 149 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 HLA-DQA1Q5Y7H0 255 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 FAM72DQ6L9T8 149 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 FAM72BQ86X60 149 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 SLC13A5Q86YT5 568 aaPredicted RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 DENND1CQ8IV53 801 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 ZNF276Q8N554 614 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 C12orf76Q8N812 135 aaPredicted RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 KCTD6Q8NC69 237 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 TEKT4Q8WW24 435 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 OVCA2Q8WZ82 227 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 CCT6BQ92526 530 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 GOLGA1Q92805 767 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 WBP2Q969T9 261 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 ZNF707Q96C28 371 aaPredicted RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 ZNF512Q96ME7 567 aaPredicted RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 PTCHD1Q96NR3 888 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 SLC22A12Q96S37 553 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 AP1M1Q9BXS5 423 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 OSBPL8Q9BZF1 889 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 LMAN2LQ9H0V9 348 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 VPS11Q9H270 941 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 TLE6Q9H808 572 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 PCDH18Q9HCL0 1135 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 HCFC1R1Q9NWW0 138 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 DDIT4Q9NX09 232 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 TRPM5Q9NZQ8 1165 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 KLHL14Q9P2G3 628 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 XPO7Q9UIA9 1087 aaKnown RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 STAP1Q9ULZ2 295 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 R3HDM2Q9Y2K5 976 aaKnown RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 ASB3Q9Y575 518 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 ANAPC1Q9H1A4 1944 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 hCG_1818297A0A087WSY0 165 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 SLC12A8A0AV02 714 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 KCNU1A8MYU2 1149 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 PGRMC1O00264 195 aaKnown RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 COCHO43405 550 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 TIMM44O43615 452 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 SLU7O95391 586 aaKnown RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 F9P00740 461 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 IGLV3-27P01718 113 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 LRG1P02750 347 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 PYGLP06737 847 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 HMBSP08397 361 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 GJA1P17302 382 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 ENPP1P22413 925 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 TNFSF4P23510 183 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 PTPN7P35236 360 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 BCL6P41182 706 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 MAPK9P45984 424 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 KCNQ1P51787 676 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 CDH6P55285 790 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 NTHL1P78549 312 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 MRPS25P82663 173 aaKnown RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 DMTNQ08495 405 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 SCAPQ12770 1279 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 SEMA3BQ13214 749 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 DPYSL3Q14195 570 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 TOMM20Q15388 145 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 TAF12Q16514 161 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 DPYSL2Q16555 572 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 PPM1LQ5SGD2 360 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 C10orf120Q5SQS8 335 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 HECTD3Q5T447 861 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 STXBP5Q5T5C0 1151 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 RNF220Q5VTB9 566 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 KAZNQ674X7 775 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 BICRALQ6AI39 1079 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 ARHGAP36Q6ZRI8 547 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 RSRC2Q7L4I2 434 aaKnown RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 MAATS1Q7Z4T9 603 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 ITIH5Q86UX2 942 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 MIB1Q86YT6 1006 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 PQLC3Q8N755 202 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 PRELID2Q8N945 189 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 NOA1Q8NC60 698 aaKnown RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 SPATA4Q8NEY3 305 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 RNF139Q8WU17 664 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 HDAC7Q8WUI4 952 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 NTAN1Q96AB6 310 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 MRPL38Q96DV4 380 aaKnown RBP3.64□□□□□ -1.83
MCF2-202ENST00000370573 TCEAL4Q96EI5 215 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms