RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 ADAMTS20P59510 1910 aa20.47■□□□□ 0.87
CUEDC2-201ENST00000369937 MYLKQ15746 1914 aa20.47■□□□□ 0.87
CUEDC2-201ENST00000369937 ACACAQ13085 2346 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 HTRA2O43464 458 aaPredicted RBP20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 AKR1B10O60218 316 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 PROSCO94903 275 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 PEX11BO96011 259 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 KRT7P08729 469 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 VIPR1P32241 457 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 EIF2S3P41091 472 aaKnown RBP20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 KIAA1024LP59773 190 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 MMRN1Q13201 1228 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 ARHGEF7Q14155 803 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 PDK2Q15119 407 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 ARMC12Q5T9G4 340 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 TIGD7Q6NT04 549 aaPredicted RBP20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 RBM44Q6ZP01 1051 aaKnown RBP20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 PGBD5Q8N414 524 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 PCDH19Q8TAB3 1148 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 SPOCK2Q92563 424 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 GRAMD1AQ96CP6 724 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 NUS1Q96E22 293 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 WDR26Q9H7D7 661 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 NT5MQ9NPB1 228 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 GPR34Q9UPC5 381 aa20.46■□□□□ 0.87
CUEDC2-201ENST00000369937 ANKRD36A6QL64 1941 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 TCEA3O75764 348 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 MPOP05164 745 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 CELA2BP08218 269 aaPredicted RBP20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 CD48P09326 243 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 CR2P20023 1033 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 IL4RP24394 825 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 GABREP78334 506 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 DPYSL3Q14195 570 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 ISXQ2M1V0 245 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 TBC1D25Q3MII6 688 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 PNCKQ6P2M8 343 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 USP45Q70EL2 814 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 FAM71BQ8TC56 605 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 FUBP1Q96AE4 644 aaKnown RBP20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 CCDC3Q9BQI4 270 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 ZNF670Q9BS34 389 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 ANP32EQ9BTT0 268 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 POLR1EQ9GZS1 481 aaKnown RBP20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 DGKBQ9Y6T7 804 aa20.45■□□□□ 0.86
CUEDC2-201ENST00000369937 APC2O95996 2303 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 GOLGA6CA6NDK9 693 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 GOLGA6BA6NDN3 693 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 TLX3O43711 291 aaPredicted RBP20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 HOXC4P09017 264 aaPredicted RBP20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 GOLGA6DP0CG33 693 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 GARSP41250 739 aaKnown RBP20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 TRAF2Q12933 501 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 SPIDRQ14159 915 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 IFI16Q16666 785 aaKnown RBP20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 ATP13A4Q4VNC1 1196 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 ANKRD20A8PQ5CZ79 823 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 PERM1Q5SV97 790 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 TAF8Q7Z7C8 310 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 OR6C4Q8NGE1 309 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 SNIP1Q8TAD8 396 aaKnown RBP20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 PDXPQ96GD0 296 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 NSMCE3Q96MG7 304 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 SEMA3CQ99985 751 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 TSPY26PQ9H489 355 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 POLR1BQ9H9Y6 1135 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 GOLGA6AQ9NYA3 693 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 TTLL3Q9Y4R7 772 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 LRRK1Q38SD2 2015 aa20.44■□□□□ 0.86
CUEDC2-201ENST00000369937 URB1O60287 2271 aaKnown RBP20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 SSU72P8A0A1W2PR75 194 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 TMEM202A6NGA9 273 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 TNFRSF10CO14798 259 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 MFSD11O43934 449 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 HEXIM1O94992 359 aaKnown RBP20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 PGLSO95336 258 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 MX2P20592 715 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 CES1P23141 567 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 TRIM23P36406 574 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 LSSP48449 732 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 EPHB1P54762 984 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 GALNT2Q10471 571 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 PAFAH1B3Q15102 231 aaKnown RBP20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 CNGA3Q16281 694 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 NCBP2-AS2Q69YL0 99 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 TEX26Q8N6G2 289 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 SCRN2Q96FV2 425 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 CCDC42Q96M95 316 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 COQ10AQ96MF6 247 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 ZNF578Q96N58 590 aaPredicted RBP20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 ZNF830Q96NB3 372 aaPredicted RBP20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 RBM15Q96T37 977 aaKnown RBP eCLIP20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 DNAJC7Q99615 494 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 PACSIN1Q9BY11 444 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 CYP4F12Q9HCS2 524 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 PHPT1Q9NRX4 125 aaPredicted RBP20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 RAI2Q9Y5P3 530 aa20.43■□□□□ 0.86
CUEDC2-201ENST00000369937 PSMD11O00231 422 aa20.42■□□□□ 0.86
CUEDC2-201ENST00000369937 MATN3O15232 486 aa20.42■□□□□ 0.86
CUEDC2-201ENST00000369937 TMEM253P0C7T8 217 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms