RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 CIDECQ96AQ7 238 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 PRRX2Q99811 253 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 CTRCQ99895 268 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 PSD2Q9BQI7 771 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 SEC22CQ9BRL7 303 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 TTLL2Q9BWV7 592 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 RC3H2Q9HBD1 1191 aaKnown RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 UXTQ9UBK9 157 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 GINS2Q9Y248 185 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 TRAV20A0A0B4J274 112 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 SMIM28A0A1B0GU29 152 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 A0A1W2PPH5 198 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 GSAPA4D1B5 854 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 USP27XA6NNY8 438 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 ZNF263O14978 683 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 MED7O43513 233 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 CSDE1O75534 798 aaKnown RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 CRTAPO75718 401 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 CST3P01034 146 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 IL6P05231 212 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 PLEKP08567 350 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 CLUP10909 449 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 C6P13671 934 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 CDH5P33151 784 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 SLC15A1P46059 708 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 TSPAN5P62079 268 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 LONRF2Q1L5Z9 754 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 SV2CQ496J9 727 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 SEZ6Q53EL9 994 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 DENND2CQ68D51 928 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 SPOPLQ6IQ16 392 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 WDR93Q6P2C0 686 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 CAMK1DQ8IU85 385 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 CLHC1Q8NHS4 586 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 U2AF1L4Q8WU68 220 aaKnown RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 DDX1Q92499 740 aaKnown RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 CDC6Q99741 560 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 RIMS4Q9H426 269 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 NXF3Q9H4D5 531 aaKnown RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 SMOC1Q9H4F8 434 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 ZNF275Q9NSD4 429 aaPredicted RBP7.55□□□□□ -1.2
BRCC3-203ENST00000369459 KANSL3Q9P2N6 904 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 SEPT3Q9UH03 358 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 ENTPD4Q9Y227 616 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 SLC22A14Q9Y267 594 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 PATJQ8NI35 1801 aa7.55□□□□□ -1.2
BRCC3-203ENST00000369459 A0A087X0T9 212 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 LOC390937A0A1W2PQ73 354 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 DDX3XO00571 662 aaKnown RBP eCLIP7.54□□□□□ -1.23e-7■■■■□ 19.9
BRCC3-203ENST00000369459 DDX3YO15523 660 aaKnown RBP7.54□□□□□ -1.2
BRCC3-203ENST00000369459 GCATO75600 419 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 TUBBP07437 444 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 H2AFZP0C0S5 128 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 FAM228BP0C875 321 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 UBTFL6P0CB48 400 aaPredicted RBP7.54□□□□□ -1.2
BRCC3-203ENST00000369459 TLX1P31314 330 aaPredicted RBP7.54□□□□□ -1.2
BRCC3-203ENST00000369459 SLC5A2P31639 672 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 GALK1P51570 392 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 SRP54P61011 504 aaKnown RBP7.54□□□□□ -1.2
BRCC3-203ENST00000369459 OSTNP61366 133 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 PHC1P78364 1004 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 OCRLQ01968 901 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 SNTA1Q13424 505 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 MTFR1Q15390 333 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 C9orf57Q5W0N0 161 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 SLC24A5Q71RS6 500 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 H2AFVQ71UI9 128 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 TOP6BLQ8N6T0 577 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 GALNT11Q8NCW6 608 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 LNX1Q8TBB1 728 aaPredicted RBP7.54□□□□□ -1.2
BRCC3-203ENST00000369459 FNDC8Q8TC99 324 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 COG1Q8WTW3 980 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 TOE1Q96GM8 510 aaKnown RBP7.54□□□□□ -1.2
BRCC3-203ENST00000369459 HPDLQ96IR7 371 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 ABCG8Q9H221 673 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 AGO3Q9H9G7 860 aaKnown RBP7.54□□□□□ -1.2
BRCC3-203ENST00000369459 CRTAC1Q9NQ79 661 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 AAASQ9NRG9 546 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 DDX28Q9NUL7 540 aaKnown RBP7.54□□□□□ -1.2
BRCC3-203ENST00000369459 HAUS2Q9NVX0 235 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 NINJ2Q9NZG7 142 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 SUCOQ9UBS9 1254 aaKnown RBP7.54□□□□□ -1.2
BRCC3-203ENST00000369459 ERGIC3Q9Y282 383 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 HBS1LQ9Y450 684 aaKnown RBP7.54□□□□□ -1.2
BRCC3-203ENST00000369459 SCN5AQ14524 2016 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 A0A0A6YYJ9 748 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 A0A1W2PPW3 197 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 TMEM120BA0PK00 339 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 SLCO1B7G3V0H7 640 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 HEXIM1O94992 359 aaKnown RBP7.54□□□□□ -1.2
BRCC3-203ENST00000369459 PRR35P0CG20 571 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 G0S2P27469 103 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 CD52P31358 61 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 PPM1AP35813 382 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 GRK6P43250 576 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 MAGEA11P43364 429 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 RGS7P49802 495 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 HK2P52789 917 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 TNNC1P63316 161 aa7.54□□□□□ -1.2
BRCC3-203ENST00000369459 ARHGAP19Q14CB8 494 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms